Polaribacter haliotis: H9I45_04055
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Entry
H9I45_04055 CDS
T06834
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
phal
Polaribacter haliotis
Pathway
phal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9I45_04055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phal03019
]
H9I45_04055
03009 Ribosome biogenesis [BR:
phal03009
]
H9I45_04055
Enzymes [BR:
phal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H9I45_04055
Messenger RNA biogenesis [BR:
phal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H9I45_04055
Ribosome biogenesis [BR:
phal03009
]
Prokaryotic type
rRNA helicases
H9I45_04055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Helicase_RecD
YbjQ_2
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
QOD61631
UniProt:
A0A7L8AHZ2
LinkDB
All DBs
Position
977230..979044
Genome browser
AA seq
604 aa
AA seq
DB search
MSTFLELGLKEPINKALTDLGYEKPTVIQEKAIPQIISSTTDLKAFAQTGTGKTAAFSLP
ILELLDESNSNVQAIILSPTRELAVQIGNNIKDFCKYLPKVKVTTVYGGSSMEEQIRSLK
RGSQIVVGTPGRTVDLINRRALKLGNVQWLVLDEADEMLNMGFKDELDKVLEATPETKQT
LLFSATFPKEVESIARNYMTKPVEITSGEKNQGSDNVSHEYYSVTERTRYPALKRIADLN
PDIYAIIFCRTRRETQEVADNLIKDGYSADSLHGDLSQGQRDSVMGKFRKKTIQILVATD
VAARGLDVTELTHVLNHKLPDQIENYTHRSGRTGRAGNKGISIVLVNGKEKGKLRQIERI
IKKKFVETKVPTGKEIVKNQLMNLIDKVHETEVNESEISEFLPSIYEKLESLNREELIQK
FVSLEFNTMLKYYENAKDLNDLSSRDNSRARATDDNMTRFFINIGRKDSLNPAKLIGLIN
DQNIGDKIEIGAIDILDTFSFFEIDKNFEDKTLEAFSSNQPDFDGRSVNVEITKKERSGG
GRRGGKKPFGKKDGGFGRRRSSDGPSSRRSSDNGGGRGRSSDRPDRSSGGDRKSGGFGRK
RKER
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatttttagaattaggcctaaaagagcctatcaacaaagcattaacagattta
ggttatgaaaaaccaactgttattcaagaaaaagcaattccacaaattatttcatctaca
accgatttaaaagcatttgcacaaacaggtacaggtaaaactgctgcttttagtttacca
atattagagcttttagatgagagtaacagcaatgttcaagcaattattttatctccaact
agagaacttgcagttcaaattggtaataatattaaagacttctgtaaatacttaccaaaa
gttaaagtaacaactgtttatggtggttctagtatggaagagcaaattagatctttaaaa
agaggttctcaaattgtggttggaactccaggtagaaccgtagatttaattaatagaaga
gctttaaaattaggaaacgttcaatggttagtcttagacgaagcagatgaaatgttaaat
atggggtttaaagacgaactagataaagtcttagaggcaactccagaaacaaaacaaact
ttattattttctgcaacattcccaaaagaagtggaatctattgcaagaaattatatgaca
aaaccagttgaaattacttctggtgaaaaaaaccaaggttcagacaatgtaagtcacgaa
tattattcggttacagaaagaacacgttacccagctttaaaaagaattgcggatttaaat
ccagatatttatgcaattatattttgtagaactcgtagagaaacacaagaagttgcagac
aatttaataaaagatggttacagtgcagattctttgcatggagatttatctcaaggacaa
agagattctgtaatgggtaaattcagaaagaaaaccatacaaatcttagttgctacagat
gttgcagctcgtggattagatgttactgaattaacacacgttttaaaccacaaattacca
gatcaaatagaaaattacacacatagaagtggtagaactggtagagcaggaaataaaggt
atttctattgttttggtgaatggaaaagaaaaaggaaaattacgccaaatcgaaagaatt
ataaaaaagaaatttgtagaaacgaaagttcctacagggaaagagattgttaaaaatcaa
ttaatgaacttgattgataaggttcacgaaacagaagttaacgaatctgaaattagcgaa
tttttaccaagcatttacgagaaattagaaagcttaaatagagaagaattaattcaaaaa
tttgtttctttagagtttaatacgatgttaaagtattacgaaaacgctaaagatttaaac
gatttatcttcaagagacaattctagagcgagagctacagacgacaacatgactcgtttc
ttcataaatatcggtagaaaagatagtttgaatcctgcaaaattaattggtttaattaac
gaccaaaatattggagacaaaatagaaattggagcaattgatattttagatactttttct
ttctttgaaattgataaaaatttcgaagacaaaacattggaagctttctcatcaaatcaa
ccagattttgatggacgatctgtaaacgtagaaattacgaaaaaagaacgttctggtggt
ggaagaagaggtggtaaaaaaccttttggaaaaaaagatggaggttttggaagacgtaga
agttcagacggaccttcttctagaagaagcagtgataatggtggtggaagaggaagatct
tcagacagacctgacagaagttctggtggagatagaaaatctggcggttttggaagaaag
cgtaaagaaagatag
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