Polaribacter haliotis: H9I45_04565
Help
Entry
H9I45_04565 CDS
T06834
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
phal
Polaribacter haliotis
Brite
KEGG Orthology (KO) [BR:
phal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phal03009
]
H9I45_04565 (rimO)
Enzymes [BR:
phal01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
H9I45_04565 (rimO)
Ribosome biogenesis [BR:
phal03009
]
Prokaryotic type
ribosomal protein modification factors
H9I45_04565 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
TMF_TATA_bd
TRAM
Motif
Other DBs
NCBI-ProteinID:
QOD61727
UniProt:
A0A7L8AID2
LinkDB
All DBs
Position
complement(1097732..1099084)
Genome browser
AA seq
450 aa
AA seq
DB search
MRTKTIKKNKINVVTLGCSKNIYDSEVLMGQLKANGKNVVHEDENDDGNIVVINTCGFIG
KAKEESIDTILHYANRKEAGEIDKVFVSGCLSERYKPDLEEQIPNVDQYFGTHDLPNLLK
VLEADYKHELIGERLTTTPKHYAYLKIAEGCDRPCSFCAIPLMRGKHVSTPIEDIVTEAT
KLAEKGIKEIMLIAQDLTYYGLDIYKKRALADLLEALAKVDGIEWIRMHYAFPTGFPMDV
LEVMKREPKVCNYLDIPLQHINTELLKSMKRGTTHEKTTALIHKFREAVPEMAIRTTLIV
GYPGETEEMFQELKDWVEEMRFERLGAFEYSHEENTGAYVLEDDVPAEVKFKRVNEIMEV
QSQISWELNQEKIGKTFRCLFDRKDGEYFYGRTESDSPDVDNDVIVDAKEHYIKIGEFID
VKIHDAGDYDLHGTPVKKQERPVPLNQRKK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacaaaaaccatcaaaaaaaataagattaacgttgttactttaggttgttctaaa
aatatttacgattcggaagtgttaatgggacagttgaaagcgaatggtaaaaacgttgta
catgaagatgaaaatgatgatggaaatatcgttgttataaatacgtgtggttttattgga
aaagcaaaagaggaatctattgatacaattttacattacgcaaacagaaaagaagctgga
gaaattgataaagtttttgtttctggatgtttaagtgaacgttataaaccagatttagaa
gagcaaatacctaatgtagatcagtattttggtacgcacgatttgcctaatttattaaag
gttttagaagcagattataagcacgaattaattggagaacgtttaacaaccactccaaaa
cactacgcatatttaaaaattgcagaaggttgtgacagaccttgttctttttgtgcaatt
cctttaatgagaggaaaacacgtttctacacctattgaagatattgttacagaagcaaca
aaattagcagaaaaaggaattaaagaaattatgttaatcgcacaagatttaacatattac
ggattagatatttacaaaaaacgtgctttggcagatttgttagaagcattggcaaaagta
gatggaattgaatggataagaatgcattatgcgtttccaacaggtttcccaatggatgtt
ttagaggtaatgaaacgtgagccaaaagtgtgtaattatttagatattcctttacagcac
ataaatacagagttgttaaagtcgatgaaacgtggaactacacacgaaaaaacgacggct
ttaattcataaatttagagaagctgttccagaaatggcaattagaacaactttaattgtt
ggttatcctggagaaactgaagaaatgtttcaagaattgaaagattgggtagaagaaatg
cgtttcgaacgtttgggagcttttgaatattcacacgaagaaaatactggtgcttatgtt
ttagaagatgatgttcctgcagaagtgaagtttaaacgtgtgaatgaaattatggaagtt
caatctcaaatttcttgggaattgaatcaagaaaaaataggaaaaacatttagatgtttg
ttcgatagaaaagatggagagtatttctacggaagaacagaatcggattcaccagatgta
gataatgatgtgattgtagacgcaaaagaacattatattaaaataggggagtttatagat
gtaaagattcacgatgctggagattacgatttacatggaacgcctgttaaaaagcaagaa
agaccagttcctttaaatcaaaggaaaaaataa
DBGET
integrated database retrieval system
