Polaribacter haliotis: H9I45_04965
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Entry
H9I45_04965 CDS
T06834
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
phal
Polaribacter haliotis
Pathway
phal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9I45_04965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phal03019
]
H9I45_04965
03400 DNA repair and recombination proteins [BR:
phal03400
]
H9I45_04965
Enzymes [BR:
phal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H9I45_04965
Messenger RNA biogenesis [BR:
phal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H9I45_04965
DNA repair and recombination proteins [BR:
phal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H9I45_04965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
AAA_22
Helicase_C_2
P-loop_SecA
RMC1_N
Motif
Other DBs
NCBI-ProteinID:
QOD61802
UniProt:
A0A7L8AIG7
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Position
1191100..1192992
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AA seq
630 aa
AA seq
DB search
MMSPEKILAQYWGFSEFRTPQKEIITAVLEKKDVITLLPTGGGKSLCFQVPALAIEGTCL
VISPLIALMQDQIENLKKLDIKAVTIPSGNSPDEIITLFDTIKFGNVKFLYISPERLQSH
LIQQKLKEVNLNLVAIDEAHCISEWGHDFRPSYRNIKILREINTKVPFIALTATANKKVL
KDIEENLELKNVNIFRKSFSRKNLAYQIFRVEDKLQRLLQIFTKTKSPAIVYVNSRKKTE
EISNFLNANGFKSSFYHAGLSKIEKQISFDNWMTEKKPIIVATNAFGMGIDKPNVGLVIH
YNLPFSIENYVQETGRAGRDNNKSFAVLLYNEHDILMFKEQLKKSLPTIKEIKEIHKKLY
QYFRISNGEILETAFDFNILEFSKKYNFSVLKTDAVLKIISNYGIIELTDNYNKKSTLRF
TTHHSSILKLGEKNTYLKNFIGVLLRTYGGLFENEIKIDEFFIAKKASITSRKVIENLKK
LQELEFVEYVSVQAASSLLFLVPREDDITINRFSKDMKQFLVQKSKKATDLLSFIKNDKL
CRSIQLLSYFDEHTSEKCDVCDVCLSERKTIKRKDLSEKIINLLKVEKMLTSKEISDSLN
SNEKDILIHLRNLLALDKVFLNHQNKFQNK
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctcctgaaaaaatactcgcccaatattggggtttttcggaatttagaacacct
caaaaagaaataattacagcagttctagaaaaaaaagatgtaattactttattaccaact
ggtggtggaaaatctttgtgttttcaagttcctgccttagcaatagaaggtacttgttta
gtaatttctccattaattgctttaatgcaagatcaaatagaaaatcttaagaagctagat
ataaaggcggttacaattccctctggaaatagcccagatgaaataattacacttttcgac
acaataaaatttgggaatgtaaaatttctttacatttcccctgaaagattgcaatctcac
ttaattcagcaaaaattaaaggaagtaaatttgaatttggttgcgattgacgaagcacat
tgtatttcggaatggggccacgattttagaccttcttacagaaacataaaaattctaaga
gaaataaatactaaggttccttttattgccttaactgcaactgcaaataaaaaagttcta
aaagatattgaagaaaatttagaactaaaaaatgtaaatatattccgaaaatctttttca
agaaaaaatctagcttatcaaatttttagggttgaagataaattacaacgcttgttacaa
atttttactaaaacaaaatcgccagcgattgtttatgtaaattctagaaaaaaaacagaa
gaaatctccaatttcctaaacgcaaacggatttaaaagtagtttttatcacgctggttta
tctaagattgaaaagcaaatttcttttgacaattggatgacagaaaaaaaacccataatt
gtggctactaatgcttttggaatgggcatagacaaaccaaatgttggtttggtaatacat
tataatttgccttttagcatagaaaattacgtacaagaaactggtagagctggtagagat
aataataaatcgttcgcagtacttttgtataacgagcacgatattttaatgtttaaagag
cagttgaaaaaatcgcttccaacaattaaagaaattaaagaaattcataaaaaattatat
caatattttagaatttcaaatggcgaaattttagaaactgcttttgattttaatatttta
gaattttctaaaaaatataatttttctgttttaaaaacagatgctgttcttaaaataatt
tctaattacggtattatagaactaacagataattataacaaaaaatctacattaagattt
actacacaccattcttctattttaaaacttggagaaaaaaatacttatttaaagaatttt
attggtgttttgttacgaacttatggaggacttttcgaaaatgaaataaaaattgatgag
ttctttatcgctaaaaaagcaagtattacttcaagaaaagtaatcgaaaatttaaaaaaa
ttacaagaactagaatttgtagaatatgtttctgtgcaagcagcttcttctcttttattt
ctagttcctagagaagatgatataacaattaatcgcttttcgaaagacatgaaacagttt
ctagttcaaaaaagtaaaaaagctacagatttactcagttttataaagaacgacaaactt
tgtagaagtatacaacttctctcctatttcgatgaacatacctcagaaaaatgtgacgtt
tgtgatgtttgtttgtcagaaagaaaaacaattaaacgaaaagatctttcagaaaaaata
attaatcttttaaaggttgaaaaaatgctgacttcaaaagaaataagcgattctttaaat
agtaatgagaaagacattttaatacatttgcgaaaccttttggctttggataaggtattt
ttaaatcatcaaaataaatttcaaaataaatag
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