Polaribacter haliotis: H9I45_08105
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Entry
H9I45_08105 CDS
T06834
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
phal
Polaribacter haliotis
Brite
KEGG Orthology (KO) [BR:
phal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phal03032
]
H9I45_08105 (topA)
03400 DNA repair and recombination proteins [BR:
phal03400
]
H9I45_08105 (topA)
Enzymes [BR:
phal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H9I45_08105 (topA)
DNA replication proteins [BR:
phal03032
]
Prokaryotic type
DNA Topoisomerases
H9I45_08105 (topA)
DNA repair and recombination proteins [BR:
phal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H9I45_08105 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
QOD59339
UniProt:
A0A7L8ABS0
LinkDB
All DBs
Position
complement(1905323..1907833)
Genome browser
AA seq
836 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGKDFQVESSYGHIADLPSKELGIDVDGDFSPKYIVSDDK
KAVVKKLKSLAKKADTVWLASDEDREGEAIAWHLKEQLDLKDESTKRIVFHEITKNAILK
AVDNPRDIDYNMVNAQQARRVLDRLVGYELSPVLWRKVKGGLSAGRVQSVAVRLIVERER
SIQDFKAETHYKVVAEFANNEGKTFKATIPKNFDSKKAAETFLKSCTKADFSIADLTKKP
AKKSPAAPFTTSTLQQEASRKLGFPVGKTMQVAQRLYEAGLITYMRTDSVNLSVDARNAA
EEEISNYYGKEYSKQRVFKSKSKGAQEAHEAIRPTNMKMHSIDTEYDQTRLYDLIWKRTL
ASQMSDALLERTNMKIENSENSKIFTANGEMIKFEGFLKVYLEGNDNEDEEQAGMLPNLK
VNEALEYNFINATQRFTSPPYRFTEASLVKQLEELGIGRPSTYAPTISTVQRRGYVEKGT
NEGVEREYQQLILSGGNVETQTLTEKTGSDKNKLVPTDIGNIVNDFLVANFSNILDFGFT
AKVENSFDDISEGNEDWTEMIKGFYHKFHDNVEDVKENADRESGERILGKHPESGKTVLV
RLGKFGPIAQIGAPEDEEKSFASLNKDQNLGTITMEEALELFLLPKTLGTYEGEEVIVSN
GRFGPYIKFGTMFVSLDKGENPMEVDLPRAEELIVAKQKADAPIYHYEDLPVQKGVGRFG
PFIKWNGMFINVNKKYNFDNLSDDDIIELIEVKKQKEIDKVIHNWEDVGIRVEKARWGRY
NVLKGKIKIELPKTTEIEKLSKDEAVKMIEAKTPKKKATKKKTTAKKTPKKTTKKK
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatttagtaattgtagagtcaccagcaaaagcaaaaaccatcgagaaattt
cttggaaaagattttcaagtagaatctagttatgggcatattgcagacttaccttccaaa
gaattaggaatagatgtagatggagattttagtcccaaatatattgtttcagacgataaa
aaggcagttgtaaaaaaattaaaatcattagcaaaaaaagcagatactgtttggttagca
agtgatgaggatcgagagggagaagcaattgcttggcatttaaaagagcaattagattta
aaagacgagagtacaaaacgtatcgtttttcatgaaattacaaaaaacgccatattaaaa
gcagtcgacaatccaagagatatcgactataatatggttaacgcacaacaagcacgtaga
gttttagatagacttgttggttatgaactatcaccagttttatggcgtaaagtaaaagga
ggtttatctgcaggtagagtacaatctgttgcagtacgtttaattgtagaaagagaacga
agcattcaagactttaaagcagaaacacattataaggtagttgcagaatttgctaataat
gaaggaaaaacctttaaggcaaccattccaaagaatttcgattctaaaaaagcagccgaa
actttcttaaaatcgtgtacaaaagcagatttttcaattgcagatttaacaaaaaaacca
gcaaagaaatcccctgcagcaccatttacaacttcaacattacaacaagaagcatcaaga
aaattaggttttccagtaggtaaaaccatgcaagttgcacaacgtttgtatgaagcaggt
ttaattacgtatatgagaacagatagtgtaaacttatctgtagatgcaagaaacgcggcc
gaagaagaaattagcaattattacggaaaagaatatagcaaacaacgtgtttttaagtca
aaatctaaaggagcgcaagaagcgcacgaagcgattagacctacaaacatgaaaatgcat
tctatcgatacagaatacgaccaaacgagattatacgatttaatttggaagcgaacttta
gcttcacaaatgagcgatgccttattggagcgtacaaatatgaagattgagaattctgaa
aattcaaagatttttactgcaaatggtgaaatgattaagtttgaaggtttcttgaaagtg
tatttagaaggaaatgataatgaagatgaagagcaagctggaatgttgccaaatttaaag
gtaaatgaagctttagaatacaattttataaacgcaacacagcgttttacgagtccacct
tatcgttttacagaagcatctttagtaaaacaattagaagaattaggaattggaagacca
tctacgtatgcacctacaatttctacagttcagagaagaggttatgtagaaaaaggaaca
aatgaaggtgtagagagagaatatcagcaattaattttatctggtggaaatgtggaaaca
caaaccttaacagaaaagacaggttcagataaaaataaattagttcctacagatattggg
aatatcgtaaacgactttttagtcgctaatttttcaaacattttagattttggttttaca
gctaaagtcgaaaattcttttgatgatatttctgaaggaaatgaagattggacagaaatg
attaaaggtttctatcacaaatttcacgacaatgtagaagatgtaaaagaaaatgcagat
agagaaagtggagaacgtattttaggaaaacacccagaatctggaaaaacagttttagtt
agacttggtaaattcggaccaattgcacaaattggagcaccagaagacgaagagaaatct
tttgcaagcttgaataaagaccagaatttaggaaccataacaatggaagaagcattagaa
ttgttcttgcttccaaaaacgttaggaacttatgaaggagaagaggtaattgtttctaac
ggacgatttgggccttatatcaaattcggaaccatgtttgtttctttagataaaggtgaa
aacccaatggaggtagatttgccaagagcagaagaattaattgttgcaaagcaaaaagca
gatgcaccaatttatcattacgaagatttgcctgtacaaaaaggagtgggacgttttgga
ccatttataaaatggaacggaatgtttatcaatgtaaataaaaaatacaatttcgataat
ctttcagatgatgatattattgagttaattgaagtaaagaagcagaaagagatcgataaa
gtaattcataattgggaagatgttggtattcgcgtagaaaaagcacgttggggaagatac
aatgtcctaaaaggtaaaattaaaattgaattgccaaaaactacagaaatagaaaaactt
tctaaggatgaagcagttaagatgattgaagcaaaaacgccgaagaaaaaagctacaaaa
aagaaaactacagccaaaaaaacgccgaagaaaacgaccaagaaaaagtaa
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