Polaribacter haliotis: H9I45_08280
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Entry
H9I45_08280 CDS
T06834
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
phal
Polaribacter haliotis
Pathway
phal03030
DNA replication
phal03430
Mismatch repair
phal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H9I45_08280
03430 Mismatch repair
H9I45_08280
03440 Homologous recombination
H9I45_08280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phal03032
]
H9I45_08280
03400 DNA repair and recombination proteins [BR:
phal03400
]
H9I45_08280
Enzymes [BR:
phal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H9I45_08280
DNA replication proteins [BR:
phal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H9I45_08280
DNA repair and recombination proteins [BR:
phal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H9I45_08280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
LEM-3_GIY-YIG
RNase_H_2
GIY_YIG_2
DEDDh_C
DUF7508
Motif
Other DBs
NCBI-ProteinID:
QOD59374
UniProt:
A0A7L8ABR9
LinkDB
All DBs
Position
1939185..1940561
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AA seq
458 aa
AA seq
DB search
MLYTVIDIETTGNGYKGSKITEISIFVFDGKKVVDEYTTLINPEQNIPPFITNLTGITNA
MVRNAPKFYEVARKIEEITKNTIFVAHNVNFDYNIIQAEFKSLGFDFKRKKLCTVRLSRK
IIPGLNSYSLGNICTSENIPINGRHRAKGDAEATTELFRRLIERDDQFIINSFLHPRSRQ
ATLPPLLDKKVVDNLPETFGVYYFKNLAKEVIYVGKANNIKQRVISHFYDKKKKEQNMCL
ETADISFIETGSELLALLLESEEIKHIYPKYNRAQRRAGEAVGLFSYEDQKGIIHLAYNR
LKLAPNPIMKYYSVAECRNHLEVLCKEFELCPKYCHLQTNVSSCFHYQLKECKGICCDKE
AVDDYNIRVRQAIKSVGIDAENLIIKETGRTKDEVGFALILDGIYKGIGYLDTSQDVLLE
NPADYQFFVEPKKDNRDIQRILTAYIRKTEEIKLLAND
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
ttgctatatacagtaatagacatagaaactacaggaaatggatataaaggttctaaaata
accgaaatatccatttttgtttttgatggaaaaaaagttgtagacgaatacacaacactt
ataaatccagaacaaaatattccgccatttattaccaatcttacaggcattacaaatgca
atggtaaggaatgcgcctaaattttatgaagttgctagaaagattgaagaaattacaaaa
aacaccatttttgtagcacataatgtaaacttcgattataacataattcaagctgaattt
aaaagtttaggattcgattttaaacgaaaaaaactatgtacagttcgtttgtcgagaaaa
attattcctggtttaaattcttatagtttaggtaatatttgtacttcagaaaatattcca
attaacggcagacacagagccaaaggcgatgcagaagccacaacagaattatttagaagg
ttaattgaaagagatgatcaatttattattaattcatttctgcacccacgttctagacaa
gcaaccttaccacctcttttagataaaaaagttgttgataatttacccgaaacttttggc
gtttattactttaaaaatttagcaaaagaagttatttatgttggtaaagctaacaacata
aagcaacgtgtaatcagtcatttttacgataagaagaaaaaggaacaaaatatgtgttta
gaaaccgcagacatttcctttatagaaactggtagcgaattactagcactacttttagag
tctgaagaaattaaacacatttatccaaaatataatagagcgcaaagaagagcaggagaa
gctgttggtttattttcttatgaagatcaaaaagggattattcatttggcttataaccgc
ttaaaattagctcccaatccaataatgaagtactattctgttgcagaatgtagaaatcat
ttagaggttctttgtaaagaatttgaattatgccctaaatattgtcatttacaaaccaat
gtctctagttgttttcattatcaactgaaagaatgtaaaggtatttgttgcgataaagaa
gctgtggatgattataatattcgtgttagacaagccattaaatctgtaggaattgatgca
gaaaatttaattattaaagaaacaggaagaacaaaagatgaagtaggttttgctttaatt
ttagatggaatctacaaaggaattggttatttagatacttctcaagatgtgctgttagaa
aacccagcagattatcaattctttgttgaaccaaaaaaagataatagagatattcaaaga
atattaacggcttatattagaaaaacagaagaaattaaacttctagctaatgattaa
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