Polaribacter haliotis: H9I45_09305
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Entry
H9I45_09305 CDS
T06834
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
phal
Polaribacter haliotis
Pathway
phal02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
phal00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
H9I45_09305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phal03021
]
H9I45_09305
Transcription machinery [BR:
phal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H9I45_09305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
HTH_AsnC-type
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QOD59561
UniProt:
A0A7L8AC54
LinkDB
All DBs
Position
2171987..2172850
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AA seq
287 aa
AA seq
DB search
MRQLKIVKQVTNRDAKSLEKYFQEISKIGLITADEEVELALKIKKGDERALNTLVSANLR
FVVSVAKQYQGQGLKLSDLINEGNLGLVKAAKRFDETRGFKFISYAVWWIRQSIMSALAE
QSRIVRLPLNKIGSISKIKKIYARLEQDEQRIPTHKEIAKQLDMSETEVAQSMKNSGRHI
SMDAPFKEGEDSNLYNVLQSDESPRPDNGLMKQSLSIEIDRALDTLSMKEAKVIKMFYGI
GNETASSLSEIGERFDLSRERVRQVKQRALNRLKSKSKGHMLRTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaacttaaaattgtaaagcaagtaaccaatcgtgacgcaaaatctttagaaaaa
tattttcaagaaattagtaaaattgggttaattactgcagatgaagaagtagagttggct
ttgaaaattaaaaaaggggatgaaagagctttaaatacacttgtaagcgcaaatttaaga
tttgttgtttctgttgcaaaacaatatcaaggacaaggtttaaaattatccgatttaata
aatgaaggaaatttaggtttggtaaaagcagcgaaacgttttgatgaaaccagaggtttt
aaatttatttcttatgctgtttggtggattcgtcaatcgataatgtctgcacttgcagaa
caatctagaattgttcgtttgcctttgaacaaaattggaagtattagtaaaataaaaaaa
atttacgcaaggttagaacaagatgagcaacgcataccaacacataaagaaattgccaag
caattagatatgtctgagactgaagttgcacaatccatgaaaaattctggacgacacatt
tctatggatgcaccatttaaagaaggcgaagattctaatttatacaacgttttacaatcg
gacgaatctccaaggccagataatggtttaatgaaacaatctttatcgatagaaattgat
agagctttagatactttgtctatgaaagaagcaaaggttataaaaatgttttatggaatt
ggaaatgagacagcttcgagtttatcggaaataggagaaagattcgatttatctagagaa
agagttcgtcaagtaaaacaacgcgctttaaatcgcttaaaatcgaaatctaaaggacat
atgttaagaacctatttaggataa
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