Parasphingorhabdus halotolerans: HF685_00405
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Entry
HF685_00405 CDS
T07423
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
phao
Parasphingorhabdus halotolerans
Pathway
phao03420
Nucleotide excision repair
phao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HF685_00405
03430 Mismatch repair
HF685_00405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phao03400
]
HF685_00405
Enzymes [BR:
phao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HF685_00405
DNA repair and recombination proteins [BR:
phao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HF685_00405
MMR (mismatch excision repair)
Other MMR factors
HF685_00405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QJB67960
UniProt:
A0A6H2DHV1
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All DBs
Position
complement(71331..73640)
Genome browser
AA seq
769 aa
AA seq
DB search
MSETVKIPAENDPPYVRGLNVPQREAVLTSEGPVLVLAGAGTGKTAALTRRLAHIVYSQK
AWPSEILAVTFTNKAAREMKERIASIVGEAFEGMPWLGTFHSIGAKMLRRHAELVGLQSN
FTILDTDDQLRLLKQLVQAAELDEKRWPPRMLAGLIDQWKNRGLNPADLDTNENERYANG
RGQEFYAAYQARLKALNACDFGDLLLHILNLLKTNREILKLYQERFKYILVDEYQDTNSS
QYLWLRLLAQERKNICCVGDDDQSIYSWRGAEVANILRFEKDFPDAKVIKLEQNYRSTPH
ILAAASGLINHNSGRLGKTLWTAEVDGEKVQVIGVWDGPEEARRTGDEIEALQQIKQVSL
NNIAILVRAQFQTREFEDRFISIGMPYKIIGGFRFYERAEIRDALAYLRVIAQPADDLAF
ERIVNVPKRGLGDKTVEKIHRLARAQGTPLAAAALSICDTDELAARARSTLTELTRSFGR
WREMAAETPHAELARIVLDECGYTGSLQADRSTEAAGRLENLTELTRAMEEYETLGEFLE
HVSLVMDNDAASDEAKITIMTMHGAKGLEFDHIFCAGWEEGVFPSQRSLDEGGLASLEEE
RRLAYVAITRAKQKCTIFHAANRRIYGQWTSSIPSRFIGELPEDHIETESSMSGGESLWR
ANWSERSDPFAHLAAANATRAGQRGPGWQRAAVSSSGGGFDTNPRTIKEARSSAVSLGNK
GREDVSIGMRVFHTKFGYGEVMEKEGNKLEIAFEKSGSKRVLDSFVEVA
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaactgtcaagattcctgctgaaaacgatccgccttatgttcgcggattaaat
gtgccgcagcgcgaggcagtgctgacatcggaagggccagtgctggttctggcgggcgcg
ggaacgggcaagaccgctgcgctcacgcgtcgactggcgcatattgtctattcgcaaaag
gcctggccatcagaaatactggcagtgaccttcaccaacaaggccgcgcgcgaaatgaag
gagcggatcgcatcgatcgtcggcgaggcatttgaaggcatgccatggctcggaaccttt
catagtatcggcgcgaaaatgctgcgccgccacgccgagctggtcgggttgcaaagcaac
ttcaccattctcgataccgacgatcagctgcgcttgctcaagcagctcgtgcaggcagcg
gaactggacgaaaagcgctggccgccgcggatgctcgccgggctgatcgaccaatggaaa
aaccgagggctcaaccccgctgatttggataccaacgagaatgagcgctatgccaatggt
cgcggacaggaattttatgccgcctatcaggcgcggctcaaggcactgaacgcctgcgat
tttggtgatttattgctgcatattctcaacctgctcaaaaccaaccgcgagatattgaag
ctctatcaggagcgcttcaaatatattctcgtcgacgaatatcaggacaccaatagctcg
caatatctctggctgcggctgctcgcgcaggagcgcaagaatatctgctgcgtcggcgat
gatgaccagagtatctactcttggcgcggcgcggaagtcgcgaatattttgcgtttcgag
aaggactttcccgacgcgaaagtaatcaagctggagcagaattatcgttccacgccgcat
attcttgccgctgcttcggggctgatcaaccacaactcgggtcgccttggcaagacgttg
tggacagctgaggtagacggcgagaaggtgcaggttatcggggtctgggatggtcccgag
gaagcacgccgcacgggtgatgagattgaggcgctacagcagatcaagcaagtttcactt
aacaacatcgccattctcgtccgcgcgcaatttcaaacccgcgagtttgaggatcgcttt
atcagcatcggcatgccctataaaattatcggcggtttccgattctatgagcgcgcagaa
attcgcgatgccctcgcctatctccgggtgatcgcccagcctgccgatgatctcgccttt
gagcgcatcgtcaatgtgcccaagcgtggtcttggggataaaactgtggagaaaattcac
cggctggcgcgcgcgcaaggaacgcctttagccgccgccgcgctttccatttgcgatacc
gacgaactcgctgcccgcgcccgcagtacgcttaccgagctgacgcgcagctttggccgc
tggcgggaaatggccgcagaaacaccccatgccgaactggcacggattgttttggatgaa
tgcggctataccggatcactgcaagcggatcgctcgacagaggctgcggggcggctggag
aatctgaccgagctcacccgcgcaatggaagaatatgaaacgctcggcgagtttctcgag
catgtctcgctggtcatggacaatgatgcggcaagcgatgaggccaaaatcacgatcatg
accatgcacggcgcaaaagggctggagtttgaccatatattttgcgccggatgggaagaa
ggcgtgtttccctcgcagcgcagtctggatgaaggcgggcttgcttcgctcgaggaagaa
cgccgccttgcttatgtcgcgatcacgcgcgccaaacagaaatgcacgattttccacgcg
gccaaccggcgtatttacggtcaatggaccagctctattccttcgcgcttcatcggcgag
ttgccggaagatcatatcgaaacggaatccagcatgtccggcggcgaaagcctgtggcgc
gccaactggagcgaacgcagcgatcctttcgcccatctcgccgccgcaaatgccacgcgc
gcaggccagcgcgggcccggctggcagcgcgctgcagtttcatcttctggcggcggcttc
gacaccaatccgcgcacgataaaagaggcccgcagcagcgcggtctcgctgggcaataaa
ggccgcgaggatgtcagcatcggcatgcgcgtcttccacaccaaattcggctatggcgaa
gtgatggagaaagaaggcaataagctggagatcgcgtttgaaaagagcggaagcaagcgg
gtgctggatagttttgtggaggtagcttga
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