Parasphingorhabdus halotolerans: HF685_00740
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Entry
HF685_00740 CDS
T07423
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
phao
Parasphingorhabdus halotolerans
Pathway
phao02020
Two-component system
phao02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
phao00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HF685_00740
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HF685_00740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phao03021
]
HF685_00740
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
phao02035
]
HF685_00740
Transcription machinery [BR:
phao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HF685_00740
Bacterial motility proteins [BR:
phao02035
]
Flagellar system
Flagellar assembly proteins
Stator
HF685_00740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
DUF1492
Motif
Other DBs
NCBI-ProteinID:
QJB68013
UniProt:
A0A6H2DJ49
LinkDB
All DBs
Position
135603..136322
Genome browser
AA seq
239 aa
AA seq
DB search
MLKTKSRASQAYGAMKIDENRLIEENQSLVTKIAWQVKSFAPDQMEIEDLIQVGLVAMVE
AAKKYVDQGHSFSTYLYVRVRGAMIDDLRSTCNLRRTSVDWHKKVRRFRDKLVQELNREP
NEGELALAMDMNPADFRQNTDRAIDVHIGSLDEVYCDSSSWFTDQEDNQHQTLEKSQMVE
LLSAKLKQLNEREQLVLNCYFVEEMQLDEIGDILDVSSVRICQIKKRALEKLQVAMTEN
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaacaaagagccgcgcatcacaagcctacggcgcgatgaaaattgacgaaaat
cggttgattgaagaaaatcagtctctggtcacaaagattgcctggcaggttaagtctttc
gcgcccgatcaaatggaaatcgaagacctgatccaagtcggtctggttgccatggtcgag
gccgcgaaaaaatatgttgatcagggacatagtttcagcacctatctttatgtgcgtgtt
cgcggagcgatgattgatgatctgagatcaacgtgcaatttgcgcagaacatctgtcgat
tggcacaaaaaagtgcgcaggttccgggacaagctggtgcaggaacttaaccgggagccc
aacgagggggaactggcgcttgcgatggacatgaatcctgccgattttcgccagaacacg
gatcgcgcgattgatgttcatatcggttcactggatgaagtttattgcgattccagtagc
tggtttacagatcaagaggataatcagcaccaaacattggaaaagtcccagatggtagaa
ctgctttccgcaaaactgaagcaactgaacgaacgcgaacaacttgtgctcaattgctat
tttgtggaggaaatgcagcttgatgagatcggggacattcttgacgtatcttcggtacgt
atctgccagattaaaaagcgtgcgttggagaagctgcaagtagcaatgaccgagaactaa
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