Parasphingorhabdus halotolerans: HF685_02460
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Entry
HF685_02460 CDS
T07423
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
phao
Parasphingorhabdus halotolerans
Brite
KEGG Orthology (KO) [BR:
phao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phao03009
]
HF685_02460
Enzymes [BR:
phao01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HF685_02460
Ribosome biogenesis [BR:
phao03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HF685_02460
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Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRM5-TYW2_MTfase
PSD5
Motif
Other DBs
NCBI-ProteinID:
QJB68306
UniProt:
A0A6H2DKX3
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Position
complement(526752..527957)
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AA seq
401 aa
AA seq
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MTANAENIIVRVAAKGDGVTADGRHVAFSAPLDEVLDDGGLIKGPHHVEPPCRHFKECGG
CSLQQLDAESYAQFVTDRVNYALEGQGLSPTKLHAPQISKPKSRVRASLRAAMVGNIFKL
GFSGAGSHRIVDLQQCEIMHPELFAVIAPLRTFLQSVARRKHDMNIELTLADQGVDLLIK
NYEPDSLDQHQALSEFAQQTGIARLSLDNGYGPETQWEPNPVTVTLGNVPVALPHSSFLQ
STADGKDALIAAMLETVGDTKLIADLFAGLGTFSFALGGERKIYAAEGSRDAISALKSAA
NIARLQVFTEHRDLYRRPLSPEELNRFGAVILDPPRAGARDQIVQLAKSEVPKICYISCN
PASFARDAKTLCEAGYKLKEVWPVGQFLWSTHVELVSSFVR
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgacggcaaatgccgaaaatataatagttcgcgttgctgccaaaggtgacggggtgacc
gctgatggccgtcatgttgcgttttccgccccgctggatgaagttctcgatgatggaggg
ctaatcaaaggcccgcatcatgtcgagccgccatgccgccattttaaggaatgtggtgga
tgtagtctccagcaactggacgcggaaagctatgcgcagtttgtcacggaccgggtgaac
tatgcgttggaagggcagggcttgagtcctacaaagttgcacgctccacaaatatcaaaa
ccaaaaagccgggtccgggccagtttgcgggccgcaatggtcgggaatattttcaaactg
gggtttagcggtgcggggagccaccgcattgttgatctgcaacaatgcgaaatcatgcat
ccggaattatttgcggtgatcgcgcctttgcggacatttctccagtctgttgcccggcgc
aagcatgatatgaatatcgaactgacgcttgccgaccaaggtgttgatttacttattaaa
aactacgaaccggattcgctggatcagcatcaggcattgtcagagttcgcccagcaaacc
ggcatcgcgcgattatcgctggataacggctatggaccggaaacacagtgggagcctaat
ccggtcaccgtgacgctcggcaatgtcccggtcgcgttgccgcattccagttttctgcaa
tcgacagcggacggcaaggatgcgctgattgcagcgatgctggaaacagtcggcgacacc
aaattgatagcggatttgttcgcaggcctcggcactttttcgttcgctttgggcggggaa
cgaaaaatctatgccgcagaaggctcgcgcgatgccattagcgctttaaaatcggcggcc
aatattgcccggttgcaggtttttaccgaacatcgtgatttatatcgtcgtcctctcagc
ccggaagagttgaaccgtttcggcgctgtcatccttgatcctccgcgtgcgggtgcgcgg
gatcaaatcgttcagttggcaaaatcggaggttcccaaaatctgctacattagctgtaat
ccggcaagttttgcgcgcgacgcgaaaacactttgcgaagcgggttacaagctcaaagaa
gtttggcctgtgggtcagtttctctggtccacccacgtcgaactagtgtccagtttcgtg
agataa
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