Parasphingorhabdus halotolerans: HF685_03115
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Entry
HF685_03115 CDS
T07423
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
phao
Parasphingorhabdus halotolerans
Brite
KEGG Orthology (KO) [BR:
phao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phao03032
]
HF685_03115
03036 Chromosome and associated proteins [BR:
phao03036
]
HF685_03115
03400 DNA repair and recombination proteins [BR:
phao03400
]
HF685_03115
DNA replication proteins [BR:
phao03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HF685_03115
Chromosome and associated proteins [BR:
phao03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HF685_03115
DNA repair and recombination proteins [BR:
phao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HF685_03115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Nup214_FG
Motif
Other DBs
NCBI-ProteinID:
QJB68417
UniProt:
A0A6H2DJV2
LinkDB
All DBs
Position
complement(650439..650714)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKQDLISSVADHSGLSKSDAGKAVDAVFDSITKALSGGGEVRLVGFGTFSTSKRKASTG
RNPRTGEPMQIPASTQAKFKAGKGLKDAVNK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacaggatcttatcagtagtgttgcagaccacagcggcctcagcaaaagcgat
gcgggcaaagccgtagacgcagtttttgattccatcaccaaagcactcagcggcggcggc
gaagttcgcctcgttggtttcggtacattctcaacatcaaagcgtaaagcttcaaccggc
cgtaacccacgtacaggcgagccaatgcagattcctgcatccacacaggcaaaattcaaa
gccggcaaaggcttgaaagacgccgtaaacaaataa
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