Parasphingorhabdus halotolerans: HF685_03130
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Entry
HF685_03130 CDS
T07423
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
phao
Parasphingorhabdus halotolerans
Pathway
phao03030
DNA replication
phao03430
Mismatch repair
phao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HF685_03130
03430 Mismatch repair
HF685_03130
03440 Homologous recombination
HF685_03130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phao03032
]
HF685_03130
03400 DNA repair and recombination proteins [BR:
phao03400
]
HF685_03130
Enzymes [BR:
phao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HF685_03130
DNA replication proteins [BR:
phao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HF685_03130
DNA repair and recombination proteins [BR:
phao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HF685_03130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_14
AAA_30
AAA_16
AAA_19
AAA_24
AAA_assoc_2
Cdc6_lid
AAA_18
RCF1-5-like_lid
Adeno_E1B_55K_N
Glyco_tranf_2_5
AAA_2
SRP54
TsaE
DUF815
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QJB68420
UniProt:
A0A6H2DJ54
LinkDB
All DBs
Position
complement(653834..655561)
Genome browser
AA seq
575 aa
AA seq
DB search
MSDSSDIFAASDVEAPEQPAPGSAQPYRVLARKYRPSSFDELIGQDAMVQTLGNAIKRDR
LAHAFLMTGVRGVGKTTTARLIAKALNCIGEDGQGGPTINPCGKCEPCRSIAEGSFIDVI
EMDAASHTGVDDVREIIEAVRYSSVSARYKIYIIDEVHMLSKNAFNALLKTLEEPPSHVK
FIFATTEVNKVPITVLSRCQRFDLKRITPELLAENFRMICEKEGVEADDDALNLIAQAAE
GSARDGQSILDQAIAHADMDGGGRIKATQIREMLGLSDRSAVRRLFGHLLAGDSTALLDA
IGEHYKIGVEPLSLMNGLLSLSHQVTLYKVGRANDPTLSEEAKAQLAQWSEELSYPVLHR
LWQLLLKGYEEVQQAHLPREACDMALLRVLCAAEMPDPGTLTKMLSDAQSTASPATQKTV
PESAQSSEPVAAKTLEVANDIPQNASDSRLPKTFDEAVELIGGVDAKLEGFLRSYMRLIE
FSPPKIIFEKSASLRADDIKTMAGLLQNITGVQWQIAEGVGEANPSISEQIQLDKEAERQ
AILDTPLVKAAMKAFPDAELLDEVTDDNLPESRSS
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattcatctgatatttttgcagccagcgacgtcgaagcgccggagcaaccggca
cccggttccgcgcaaccttatcgcgtattggcgcggaaataccggccttccagctttgac
gagttgattgggcaggacgcgatggtgcagacgctaggcaatgccattaaacgcgaccgg
ctcgcccatgcattcctgatgaccggcgtccgcggggtcgggaaaacaacgaccgcgcgc
cttatcgccaaagcgctcaactgcattggcgaagacgggcagggcggaccgaccatcaat
ccgtgcggcaaatgcgaaccttgccgatcaattgccgaaggcagttttattgatgtcatc
gagatggatgccgctagccataccggagttgatgacgttcgcgaaattatcgaagccgtg
cgctattcctcggtttccgcgcgttacaagatctacattatagacgaagtccacatgctg
tcgaaaaacgcgttcaacgcactgttgaaaacgctggaggaaccgcctagccatgtgaaa
ttcatattcgcgacgactgaagtgaacaaagtgccgatcacggtgctgtcccgctgccaa
cgctttgatttgaagcggattaccccggagctgctggccgaaaattttcgcatgatatgt
gaaaaggaaggcgttgaagccgacgacgatgctctcaatctgattgcgcaagcggccgaa
ggatctgcgcgcgatggccagtcgattttggatcaggccattgctcatgccgatatggac
ggcggcggcaggatcaaagccacacaaatccgggaaatgctgggcctgtcggatcgcagc
gccgtgcgccgtttatttggccatttgctggctggcgattcgactgcattgctagatgcc
attggcgagcattataaaatcggggtggagccgctttccttgatgaatggcttgttgtcg
ctttcgcatcaagtgacgctctacaaagtcggtcgcgccaatgatccgacgttgtccgaa
gaggctaaagcccagctcgcacaatggtcggaagaactttcttatccagttctccacagg
ctatggcagcttcttctcaaaggttatgaagaggtgcaacaggcacatcttccacgcgag
gcttgcgatatggcattgctgcgcgtgctttgtgcggcagaaatgcctgatcccggcaca
ctaacgaagatgctgagtgacgcgcaatcaactgcctcgcccgcgacacagaaaacagtt
cctgaatcggcgcaatcatcagagcctgtcgctgcgaaaacgctggaagtcgctaatgat
attccgcagaacgcttccgatagccggttgccgaagacttttgatgaggcggtcgagttg
atcggtggtgtcgatgcgaaacttgaaggttttcttaggagctacatgcggttgatcgaa
tttagtcctcccaagattatattcgaaaaatcagcgtcgttgcgggctgatgatattaag
acaatggctggattgttgcagaatataaccggagtgcaatggcagattgccgaaggggtt
ggcgaagcgaacccaagtatttccgaacaaattcagctggataaagaggccgagcgccag
gccattctcgataccccgttggtcaaagcggcgatgaaggcctttccggatgccgaattg
ctggatgaagtgacagacgataatttaccagaatcaaggagctcatag
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