Parasphingorhabdus halotolerans: HF685_03295
Help
Entry
HF685_03295 CDS
T07423
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
phao
Parasphingorhabdus halotolerans
Pathway
phao00300
Lysine biosynthesis
phao00470
D-Amino acid metabolism
phao01100
Metabolic pathways
phao01110
Biosynthesis of secondary metabolites
phao01120
Microbial metabolism in diverse environments
phao01230
Biosynthesis of amino acids
Module
phao_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
phao00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HF685_03295
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HF685_03295
Enzymes [BR:
phao01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HF685_03295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QJB68447
UniProt:
A0A6H2DJY4
LinkDB
All DBs
Position
complement(686273..687508)
Genome browser
AA seq
411 aa
AA seq
DB search
MNKVKPVGPIPAGYDTLHEELAIGGAMASALVRQHGSPLFVYSKQLLTRRMADLRAAMPE
KLNIHYAMKANPFGPVLKHMVSLADGIDIASAGELLMALASGAKPEHISFAGPGKRDEEL
LRAIEAGVTINIESPTECDRALLIGAGAGQNPKLAIRVNPTFDLKGSGMKMGGGAKPFGM
DVELVASTVRKIIEAGAHWRGFHIFAGSQALKADAIIETQTQTIALAAQLADDIGAAPEH
VNLGGGFGIPYFPGDEAVDIARVGDALKAQLGDLPIILQDTQFAIELGRYLVGEAGVYLT
QIVDRKQSCGETFLVTDGGLHHQLAASGNFGTVVRRNYPAAIATKYNFEPTETVSIVGCL
CTPLDRLSDNAAMPKANVGDIVAIFCAGAYGATASPANFLGQGPAKEILID
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagttaagcccgttggtccgataccggctgggtatgacacattgcacgaagaa
ttggcaattggcggcgctatggccagcgcgttggtgcgtcaacatggttcaccgttgttt
gtctattccaaacaattgcttacgcgtcgcatggccgacttgcgggcagcgatgccggaa
aagctaaatattcactatgcgatgaaggccaatccatttggaccagtgctcaaacatatg
gtttcactggctgacgggattgatatcgcatcggcgggagagcttttgatggcattggct
tctggggcgaaacccgagcacatcagttttgcaggccccggcaaacgcgatgaggaattg
ctgcgcgccatagaagcgggtgtgacaataaatatcgagtcgccaaccgaatgtgatcgt
gctttgttgattggcgcaggcgcaggccagaatcctaagctggctattcgcgtaaacccg
accttcgatctcaagggttcgggaatgaagatgggtggtggtgccaagccttttggaatg
gatgtcgagctggttgcgtctacggtcaggaaaataatcgaagcgggtgcgcactggcgg
ggatttcatatttttgctggctcccaagccttgaaggctgatgcgattatagaaacgcag
acccaaaccatcgcgcttgctgcccaactggctgatgatattggtgcggcaccagagcac
gtaaatctcggcggtggttttggaatcccttatttcccgggcgatgaggcagtggatatt
gctagagtcggagatgccttgaaagcgcaactgggtgatttgccgataattcttcaagac
acccagttcgctatcgagttgggtagatatcttgtcggcgaagcgggcgtctatctcact
caaatcgttgaccgcaaacaaagctgtggcgaaacattcttggtaacggacggcggattg
catcatcagctggctgccagcggaaatttcggaacagtcgttcgccgaaactatccagct
gcaatcgctacgaaatataatttcgagccgactgagacagtgtctatagtgggctgcctt
tgtacaccattggaccgtttatctgacaatgctgccatgccaaaggccaatgtcggtgat
atcgtcgcgatcttctgcgcaggcgcttatggcgcgactgcaagccctgcgaattttctc
ggtcaggggccagcaaaagagatactaatcgattga
DBGET
integrated database retrieval system
