Parasphingorhabdus halotolerans: HF685_04375
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Entry
HF685_04375 CDS
T07423
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
phao
Parasphingorhabdus halotolerans
Brite
KEGG Orthology (KO) [BR:
phao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phao03016
]
HF685_04375 (truB)
Enzymes [BR:
phao01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HF685_04375 (truB)
Transfer RNA biogenesis [BR:
phao03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HF685_04375 (truB)
Prokaryotic type
HF685_04375 (truB)
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
zf-C2H2_assoc
Motif
Other DBs
NCBI-ProteinID:
QJB68615
UniProt:
A0A6H2DKY7
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All DBs
Position
complement(902276..903292)
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AA seq
338 aa
AA seq
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MKPHGWIILDKPLELGSTQAVGAVKRNLREAGLLGKGKNKLKVGHGGTLDPLATGVLPIA
IGEATKLCGRMLDASKIYEFTIGFGTETETLDVESDVTEVSDHRPTVAEIEAVLPQFTGP
IEQIPPKYSALKIDGKRAYDLARAGIEVEMKVRGVTVYSISPLPVRGGAGGGESSLQGAA
DDEPHPNPSPKGEGLNSITLTATVSKGTYIRSLARDIARALGTYGHVSMLRRTKAGPFTL
DHAISLDKLDEIGKGADIKEYLLPLEAGLDDIPAFDLAPDQAKMLRQGLTLDVRNLPKEM
VRNPAINGTFLATENAGSPVALAEIVDGTVKVVRGFNM
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccccacggttggatcattcttgataaaccgcttgaactaggctcgacgcaggcg
gttggggctgtgaagcggaatttgcgggaggctggcttgcttggcaagggcaagaacaag
ctgaaggtggggcatggcgggacgctggatccgctggcgaccggggttttgccgattgcg
attggggaggcgacgaagctttgcggacgcatgctggacgcttcgaagatatatgaattt
accattgggtttgggacagagaccgaaacgctggatgtggaaagcgatgttacagaagtt
tctgatcatcggcctactgtggcggagattgaagcggttttgccgcagtttaccgggccg
attgaacagataccaccgaaatattctgcgctgaagattgatggcaagcgggcctatgat
ctggcgcgggccggcattgaggtagagatgaaggtcaggggggtgacggtttactctatt
tcacccctccccgtcaggggaggggccgggggtggggaatctagtctacagggcgctgcc
gacgatgagccccaccccaacccctcccctaaaggggaggggcttaacagcatcaccctg
accgccaccgtctcaaaaggcacctatatccgatctctcgcccgcgatatcgcccgcgct
cttgggacttacggccatgtctcgatgctacgccgcacaaaggcaggcccattcacccta
gatcacgcgatttcgctggacaaactcgatgaaattggtaagggcgcggacattaaagaa
taccttttgccacttgaggcagggctggacgacatcccggcttttgacctcgctcctgat
caggcaaaaatgcttcggcaaggcttaacgctggacgttaggaatttgccaaaggaaatg
gtcaggaaccccgcaatcaacgggacttttctggcgacagagaacgcaggttctccggtt
gcgctagcagagattgttgatggcaccgtaaaggtggttcgcgggtttaacatgtaa
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