Parasphingorhabdus halotolerans: HF685_05920
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Entry
HF685_05920 CDS
T07423
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
phao
Parasphingorhabdus halotolerans
Pathway
phao00061
Fatty acid biosynthesis
phao00071
Fatty acid degradation
phao01100
Metabolic pathways
phao01212
Fatty acid metabolism
phao02024
Quorum sensing
phao04146
Peroxisome
Module
phao_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
phao00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HF685_05920
00071 Fatty acid degradation
HF685_05920
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HF685_05920
09145 Cellular community - prokaryotes
02024 Quorum sensing
HF685_05920
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
phao01004
]
HF685_05920
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phao04147
]
HF685_05920
Enzymes [BR:
phao01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HF685_05920
Lipid biosynthesis proteins [BR:
phao01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HF685_05920
Exosome [BR:
phao04147
]
Exosomal proteins
Exosomal proteins of breast milk
HF685_05920
Exosomal proteins of breast cancer cells
HF685_05920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF7725
Motif
Other DBs
NCBI-ProteinID:
QJB68871
UniProt:
A0A6H2DM90
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All DBs
Position
1238285..1239898
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AA seq
537 aa
AA seq
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MYQVKLTESFFPARADTPYRETTVARLLREQADTRRNELALQELLEDASIGRTWTYAELL
ADCEKLGRALASRHPAGARIAIWASNCPEWVLMQYAAMLAGLTVVTVNPAYIARELRYVL
EQSGAVGLYHSSAVRGRALGPVAEEACYGLANAVQQFDISDMDTLLDGPENVDLRETHPD
HIMQIQYTSGTTGLPKGVLLKQGGVLQNNADIVGRWGVEPGDGILVPTPLFHAGGSAFMF
GALTTGAVYISVPYFDPALMINAIESTRPRFTGGVPTMLVLMVDEVKRSGKDMSSVERMM
CGAAMVAPELAKNARSLFGAPVHVIYGQTEAAPGITFSFADDSEEDLTQTIGQPLPHMDV
AILNPSDNSVCAIGEQGEICVRGYNVMHGYNDNPEATADAIDQDGWLHSGDLGTMDERGY
LKITGRVKEMIIKGGENLFPAEIENAMLEHPMVAEVAVAGVPDDKYGELVACFMRAVDGQ
KPDENELRTFIRERLSPQKTPSFWLWVEEWPMTGSGKIQKFALSEAFVRGDYNDQLA
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaagtcaaactcacggaatctttttttccggcgcgggccgacacgccctatcgc
gagacgacggttgcccgattgctgcgggagcaagcggatacccgcaggaacgagctagcg
ctccaggaattactggaagatgccagcattgggcggacctggacctatgccgaattgctg
gccgattgcgaaaagctgggtcgcgctttggcatcccggcacccggcaggcgcgcggatc
gcgatatgggcgagcaattgtccggaatgggtgctgatgcaatatgccgcgatgctggct
ggcctgaccgtggtgaccgtcaaccccgcatatatcgcgcgcgagcttcgctatgttctc
gaacaatcgggtgcggttggcctctatcattcatcggccgtgcgcgggcgggcgctgggt
ccggttgcggaagaagcctgttacggcctcgcaaacgcggttcaacaatttgatatcagc
gatatggacacgctattggatgggcctgaaaacgtcgatctccgcgagacacatcccgat
catatcatgcagattcaatatacctcgggtacgaccgggctgcccaagggcgtattgctt
aagcagggtggcgtgttgcagaataatgccgatattgtgggacgctggggcgttgaaccg
ggtgacggcattcttgtcccgacaccgcttttccatgctggcggttcggccttcatgttt
ggcgcgctaacaactggagcggtctatatatccgtgccctatttcgatcccgccttaatg
atcaacgcgattgaaagcacgcgtccccgttttaccggtggggtgcccacgatgctggtg
cttatggtcgatgaagtgaaacgcagcggcaaggatatgagttcggttgagcggatgatg
tgcggggccgccatggtcgcgccggaactggcgaaaaacgcccggagcctttttggcgcg
cctgtgcatgttatctatggccagaccgaagccgcgccggggatcactttctccttcgcc
gacgacagcgaagaagacctgacccagaccattggtcagccgctgccgcacatggacgtc
gcgatcctcaacccttccgacaattcagtctgcgcgattggcgaacagggcgagatttgt
gtgcgtggttacaatgtcatgcacggctataatgacaatcccgaagccaccgcagatgca
attgatcaagatggctggctacactccggcgatctcggaacgatggacgagcggggctat
ttgaaaatcactggccgggtaaaggagatgatcatcaagggcggcgagaacctgttccca
gcggaaatcgagaatgcgatgctggagcatccaatggttgcggaagtggcagtagccggg
gtcccggatgacaaatatggcgaactggttgcttgttttatgcgcgccgtcgatggtcaa
aagcccgatgaaaatgagctacgaacctttattcgcgaacggctctccccacagaaaacg
ccaagtttttggttgtgggtcgaagaatggccaatgacaggatcaggtaaaatccagaaa
ttcgctctttcggaagctttcgtgcgcggagactataacgaccagctcgcttga
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