Parasphingorhabdus halotolerans: HF685_07145
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Entry
HF685_07145 CDS
T07423
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
phao
Parasphingorhabdus halotolerans
Pathway
phao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HF685_07145 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phao03019
]
HF685_07145 (recQ)
03400 DNA repair and recombination proteins [BR:
phao03400
]
HF685_07145 (recQ)
Enzymes [BR:
phao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HF685_07145 (recQ)
Messenger RNA biogenesis [BR:
phao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HF685_07145 (recQ)
DNA repair and recombination proteins [BR:
phao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HF685_07145 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QJB69088
UniProt:
A0A6H2DLK8
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All DBs
Position
1482547..1484337
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AA seq
596 aa
AA seq
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MHTALLPLLKSTFGFSDFRGVQDQVLDRVMGKQNTLAVMPTGAGKSLCYQLPAIANEGTV
VVISPLIALMHDQLRSAEAVGIRAATLTSADDNRAETIARLKAGELDLFYAAPERASQSH
FRELLEQTNISMFAIDEAHCVSEWGHDFRPDYRLLRPLLDHFADVPRLALTATADHHTRE
DILVQLGIEHNGLIIAGFDRPNIRYNISPRKGLTGQIKDLIDRIPGSGIIYAPTRNATEK
LADQIAKTGRSARAYHAGLHSEIRQKNQADFVASEDMVMVATIAFGMGIDKPDVRFVAHA
GLPKSIEAYYQETGRAGRDGDPAEAHLFWGAEDFARARQRLSEVDEKRMDSERTRLAAMG
GLVEAAGCRRAILLRHFGEEPPKQCGNCDNCLHAPATRNVTELARKFLSAVYRTGQSFGV
THLEAVLTGRQDEKIRARGHDKLSVFDIVSDEDAALIKPVSRSLLLRDALRNNEYGGLMF
GPEARAILKGDEEVAIVEPPKRERRSRRGGGASPNPVGDPLFDALRAKRMELSKELGVPP
YVIFHDSVLRDMTGFKPRSLSALGELPGIGAAKLEKHGESFLQVIREVTERQQESV
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgccctcctcccgctcctcaaatccaccttcggctttagcgattttcgcggg
gttcaggatcaggttctggatcgcgtcatgggaaaacaaaatacactggccgtcatgcca
accggagcgggtaaatcactctgttaccagctccccgcgatcgccaatgaaggcacggtc
gtcgtgatctcaccgctgatcgcgctgatgcacgatcaattgcgtagcgccgaggcggtt
ggcattcgcgccgccaccctcacctccgccgatgataatcgcgccgagacaatcgcgcgg
ctgaaggcaggcgagctggatttgttttacgctgcgccagaacgcgcctcgcaatctcat
ttccgcgaactgcttgagcaaaccaatatttcgatgtttgccattgatgaagcgcattgt
gtctctgaatggggtcatgatttccgtccggactatcgcctgctgagaccactgctagat
catttcgcagatgtgccgcggctggcgctcacagctactgccgaccatcacacccgcgaa
gatatattggtgcagctcggaatcgaacataacggccttatcattgcaggctttgatcgc
ccgaacatccgctataatatttcgccgcgcaaaggactgaccggacagatcaaggatctg
attgaccgcattcccggctccgggatcatctatgcgccaacccgcaacgcgaccgaaaaa
ctcgcagaccaaattgccaagaccggtcgcagtgcccgcgcttatcatgcgggattgcac
tcagaaatccgtcagaaaaaccaagctgattttgtcgcctccgaagacatggtgatggtc
gccactattgcttttggcatgggtatcgacaaaccggacgtgcgtttcgttgcccacgcc
gggctgccgaaatccattgaagcttattatcaggagaccggccgtgccggacgcgatggc
gatccggcagaagcgcatctgttctggggcgcggaagattttgcccgcgcgcgtcagcga
ttatccgaagtcgacgagaaacgcatggatagcgaacgcacccggctggctgccatgggc
gggctggtagaagcagccggatgccgccgcgccatattgctcaggcattttggtgaagaa
ccgccaaagcaatgcggcaactgcgacaattgcctccatgccccggccacccggaatgtt
accgaactggcgcgcaaattcctgtctgcggtttatcgtaccggccagagctttggtgtc
actcatttggaagccgtactgaccggtcggcaggacgaaaaaattcgcgcgcgcggtcat
gacaagctgtcggttttcgatatcgtcagcgatgaagacgcggcgctgatcaaacctgtc
tcgcgatctctgctgctgcgcgatgcgctgcgcaataatgaatatggcgggctgatgttt
ggccccgaagcccgagccattttgaagggcgatgaagaagtcgcgattgtggaaccaccc
aagcgcgagcgccggagccgtcgtggtggcggcgcctctcccaatccggtcggcgatccg
ctgttcgacgccctgcgtgccaagcgtatggagctatccaaggagctgggcgtgccgcct
tatgtgatattccatgacagcgtgcttcgtgatatgacaggctttaagccacgcagcctg
tccgcattgggcgaattgcccgggatcggcgcggcaaagttggaaaaacacggcgagtca
tttttgcaggtgatccgcgaagttacggaaaggcagcaggagagcgtatga
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