Parasphingorhabdus halotolerans: HF685_08745
Help
Entry
HF685_08745 CDS
T07423
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
phao
Parasphingorhabdus halotolerans
Brite
KEGG Orthology (KO) [BR:
phao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phao03032
]
HF685_08745 (gyrB)
03400 DNA repair and recombination proteins [BR:
phao03400
]
HF685_08745 (gyrB)
Enzymes [BR:
phao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HF685_08745 (gyrB)
DNA replication proteins [BR:
phao03032
]
Prokaryotic type
DNA Topoisomerases
HF685_08745 (gyrB)
DNA repair and recombination proteins [BR:
phao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HF685_08745 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
DUF2239
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QJB69356
UniProt:
A0A6H2DNX0
LinkDB
All DBs
Position
1790622..1793165
Genome browser
AA seq
847 aa
AA seq
DB search
MIENTENETPEQASIPSTDKTPDQANQNEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSG
LHHMVFEVSDNAIDEALAGHCDLILITLNPDGSVSVEDNGRGIPTGMHTEEGVSAAEVIM
TQLHAGGKFENTSDDNAYKVSGGLHGVGVSVVNALSEWLELNIWRDGKEHNMRFEFGDAV
RPLEVIGDAPPADNESGFKKGTKVTFFPSPATFKITEFDFEKLEHRYRELAFLNSGVHIL
LRDARHEETKEIDLYYEGGIAAFVQYLDRNKTPLVPDPIAIHGDRDDVIIDVALEWNDSY
YENVLCFTNNIPQRDGGTHLAAFRSALTRTLNNYAESSGALKKEKVKLTGDDMREGLTAI
VSVKLPDPKFSSQTKDKLVSSEVRQPLESLMADKLAEWLEENPANASMVVQKVIDAAAAR
EAAKKARELTRRKGAMDIASLPGKLSDCREKDASKCELFLVEGDSAGGSAKQGRDSNYQA
ILPLKGKILNVERARFDRMLSSKEVGTLIQAMGTGIGREDFNLEKLRYHKIVIMTDADVD
GAHIRTLLLTFFYRQMPEIILGGHLYIAQPPLYKVGKGKSEVYLKDDNALDHYLVDMGLA
NMVLQTIEGARSGEDLRGLIEHARRMRSLMAYVPRRYDSTIVEGMALTGALNPDHGLAER
QAAVDATAAWMDKVDEEGKWSGSVSEEGGYLFERLWRGVTDHHIIEQKFLESAEGRKLHK
LASEETATYTSGSRLVKIASSEADASDDDDGIGTEGTLITRPSELLDTVLAAGRKGIAIS
RYKGLGEMNAEQLWETTLDPEVRSLLQVTVEQADVTDEIFTKLMGDVVEPRREFIVDNAL
NVANLDV
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaacaccgaaaatgaaaccccggaacaagcttccatcccttccaccgacaag
actcccgatcaggcaaatcaaaacgaatatggcgccgattccatcaaggttctcaagggc
ctggacgctgttcgcaaacggcctggcatgtatattggcgacacggacgatggcagcgga
ctgcaccacatggtgtttgaagtgtccgacaatgcgattgatgaagcgctggccggccat
tgcgaccttatcctgatcacgctcaaccctgacggcagtgtgtcggtcgaagataatggc
cgtggcatccccaccggcatgcacaccgaggaaggtgtatcggcagccgaggttatcatg
acccagctccatgcaggcggtaaattcgagaataccagcgacgacaatgcttacaaagtc
tccggcggtcttcacggtgtcggcgtgtccgttgtgaatgcgctgtcggaatggctggaa
ctcaacatttggcgggacggcaaagagcataatatgcgctttgaatttggcgatgccgtg
cggccgctggaagtgattggtgacgcgccgcctgcggacaatgaaagcggtttcaaaaag
ggaacgaaggttacgttctttccgtcgcctgctacgttcaagatcactgaattcgacttt
gaaaaactcgaacaccgctaccgcgaactcgcgtttctcaatagtggcgtccatatcctg
ctgcgtgacgcgcggcatgaagagacgaaagaaatcgatctctattatgaaggcggcatt
gcagcttttgtacagtatctggatcgcaacaagacgcctctggttcccgatcctatcgca
atccacggcgatcgcgatgatgtgattatcgacgtcgcactggagtggaatgattcatac
tatgagaacgtcctctgctttaccaacaacatcccgcagcgcgatggcggcacccatctg
gcagctttccgctcggcgctaacccgcacgcttaacaattatgccgaaagctccggcgcg
ctcaagaaagaaaaagtcaaactcaccggtgatgatatgcgcgaaggcctgaccgcgatt
gtctcggtgaagctgcctgatccgaagttcagctcacagacaaaagacaagctcgtctcc
tccgaggtgcgtcagccgctggaaagcctgatggccgacaagcttgccgaatggctggaa
gaaaaccccgccaatgccagcatggttgtacagaaagttattgatgctgctgctgcccgt
gaagcggcgaaaaaggcgcgcgaactgactcggcgcaaaggcgcaatggatatcgcctcg
ctacccggcaagctatctgattgccgcgagaaagatgcgagcaaatgcgaactttttctg
gtggaaggagactccgctggcggttctgcgaaacagggccgcgatagcaattatcaggcg
atcctgccgctcaaaggcaaaatcctcaacgtcgagcgcgcgcgttttgaccggatgctt
tcgagcaaggaagtgggcacgctgatacaggccatgggcaccggcattggccgcgaggat
ttcaatcttgaaaaactgcgctatcacaagattgtcatcatgaccgatgctgatgtcgac
ggcgcgcacatccgcacgttgctgctgacctttttctatcgccagatgcccgaaatcatc
ttgggcgggcatttgtatatcgcccagccgccgctctacaaagtcggcaaaggcaagagc
gaagtttatctcaaagacgataacgcgctcgatcattatcttgtcgatatgggcctcgca
aacatggtgctgcaaaccatcgaaggtgcgcgctccggcgaagacctgcgcgggttgatc
gaacacgcgcggcggatgcgctcgcttatggcctatgtgccgcgccgctatgacagcacg
attgtggaaggcatggcactcaccggcgcgctcaatcccgatcatggactggccgaacgg
caggcagccgtcgacgcaacggcagcgtggatggacaaggttgatgaagaaggcaaatgg
tccggcagcgtctccgaagaaggcggctatctgttcgagcggctatggcgcggcgtgacg
gaccatcatattatcgaacagaaattccttgaaagcgccgagggccgcaaactccacaag
ctcgccagcgaagaaaccgcgacctacaccagcggcagccgcctggtgaaaatcgcatct
agcgaagccgatgcgagcgatgatgatgacggtatcggcaccgagggcactttgataacc
cgcccgtcggaactgctcgacaccgtgctcgccgctggccgcaagggcatagccatctcc
cgctacaaaggccttggcgaaatgaacgccgagcagctgtgggaaaccacgctcgatccc
gaagtccggtcattgttacaggtcaccgtcgaacaagctgatgtgaccgacgaaattttc
accaaactgatgggtgacgtggtcgaaccgcggcgggaatttattgtggacaatgctttg
aatgtcgccaatctggatgtttga
DBGET
integrated database retrieval system
