Parasphingorhabdus halotolerans: HF685_09195
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Entry
HF685_09195 CDS
T07423
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
phao
Parasphingorhabdus halotolerans
Pathway
phao00300
Lysine biosynthesis
phao00470
D-Amino acid metabolism
phao01100
Metabolic pathways
phao01110
Biosynthesis of secondary metabolites
phao01120
Microbial metabolism in diverse environments
phao01230
Biosynthesis of amino acids
Module
phao_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
phao00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HF685_09195 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HF685_09195 (lysA)
Enzymes [BR:
phao01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HF685_09195 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QJB69436
UniProt:
A0A6H2DP47
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Position
complement(1874873..1876132)
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AA seq
419 aa
AA seq
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MDHFQLKNGVLYAEDIPVPQIAAEVGTPVYIYSRATLERHARVFRQGLKDVGKIHLAFAV
KANPNLAVLRVLANQGYGADVVSGGELERALAAGMKPEDIVFSGVGKTRAELTLGLDKGI
GQFNLESEEEGQLLAEIAAARGAQAPATLRVNPDVDAGTHAKISTGKKENKFGVGIDVAP
NIYARLSKLDGLNLRGVAVHIGSQLQNLDPLEKCYARMGELVEQLRGAGHEISHVDLGGG
LGVPYKPEDNPPSPADYGAMVERVTKGWNVTLMFEPGRVIAGNSGIMATQVIRIKPGVNS
DFVIVDAAMNDLMRPAIYDAWHHFEAVEPTGETMIASIVGPICESSDIFTKERKVDRVAT
DDLGIFRTAGAYGATMANTYNSRPLVPEVLVDGDKYAVVAERIEPATIMAAEQVPDWLK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
ttggaccattttcagctcaaaaacggcgtgctttacgcagaagatatccccgtaccgcag
attgcagcagaggtgggaacgccggtctatatctattcccgcgcaacattggaacggcac
gctcgcgtatttcgtcaaggcctgaaagatgtcggcaagatccatcttgcttttgccgtc
aaggccaatcccaatctggcggtgctgcgggtgcttgccaatcagggctacggcgcggat
gtggtatctggcggagaactggaacgagcgttggccgctggcatgaagcctgaagatatt
gtgttctccggcgttggcaaaacccgcgcagaattaacgctcgggttggataaaggcatt
ggccagtttaatctggaatccgaagaagaaggccagttgctggcggaaattgctgccgct
cgtggcgcgcaagcgcccgcaactttgcgcgtcaatcccgacgtggatgccggtacgcac
gcgaaaatatcaaccggtaagaaagagaataaatttggcgtgggcattgatgtcgcgcca
aatatttatgcgcgactgtccaaattggatgggctgaatctacgcggcgtcgcggttcat
atcgggagtcagctgcaaaacctcgacccgctggaaaaatgctatgcgcgcatgggtgaa
ctggtcgagcaattgcgcggcgctggccatgaaatcagccatgttgatctgggcggcggc
ttaggtgtgccttacaagccagaggataatcccccaagcccggccgattatggcgctatg
gtggagcgggtaacaaaaggctggaacgtaacactgatgtttgaaccgggcagggtgatc
gctggcaacagcggcatcatggcgacacaggtaatccgtatcaagccgggtgtgaatagc
gactttgtgattgtggatgcggcgatgaacgatctgatgcggcctgcgatatatgatgca
tggcatcattttgaggcggtggaacccacaggcgaaacaatgatagctagcattgtcgga
ccgatttgcgagagtagtgatatttttaccaaggagcgtaaggtggaccgggttgctact
gatgatcttggtatatttcgcacagctggcgcttatggtgcaacgatggccaacacctat
aacagtcgcccgctggtgcccgaggttcttgtcgatggcgacaaatatgcggtggttgcc
gaacggattgagccagcgacaatcatggcggcggagcaagtgccggactggttgaaatga
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