Parasphingorhabdus halotolerans: HF685_09920
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Entry
HF685_09920 CDS
T07423
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
phao
Parasphingorhabdus halotolerans
Pathway
phao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HF685_09920 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phao03019
]
HF685_09920 (groL)
03110 Chaperones and folding catalysts [BR:
phao03110
]
HF685_09920 (groL)
03029 Mitochondrial biogenesis [BR:
phao03029
]
HF685_09920 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phao04147
]
HF685_09920 (groL)
Enzymes [BR:
phao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HF685_09920 (groL)
Messenger RNA biogenesis [BR:
phao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HF685_09920 (groL)
Chaperones and folding catalysts [BR:
phao03110
]
Heat shock proteins
HSP60 / Chaperonin
HF685_09920 (groL)
Mitochondrial biogenesis [BR:
phao03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HF685_09920 (groL)
Exosome [BR:
phao04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HF685_09920 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HF685_09920 (groL)
Exosomal proteins of breast cancer cells
HF685_09920 (groL)
Exosomal proteins of colorectal cancer cells
HF685_09920 (groL)
Exosomal proteins of bladder cancer cells
HF685_09920 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QJB69556
UniProt:
A0A6H2DPG4
LinkDB
All DBs
Position
complement(2016438..2018090)
Genome browser
AA seq
550 aa
AA seq
DB search
MAGKDVKFGRDARERILKGVNTLADAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEI
ELKDKFENMGAQMLREVASKTNDVAGDGTTTATVLAQAIVKEGMKSVSAGMNPMDLKRGI
DLAVDKVVADLKKRSKDVKGSEEIAQVGIISANGDVEVGQKIAEAMEKVGKEGVITVEEA
KGLDFELDVVEGMQFDRGYLSPYFITNPDKMIADLENPYILIHEKKLTNLQPMLPILEAV
VQAGRPLLIIAEDIEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTKGEM
ISEDLGIKLESVTLGMLGEAKNVTIDKDNTTIVDGAGKSKDIKARVEAIRNQIESTTSDY
DKEKLQERLAKLAGGVAVIKVGGATEIEVKEKKDRVDDALHATRAAVEEGIVPGGGAALL
YATSALKGLEGINEDQTRGIDIVRKALQSPVRQIAENAGFDGAVVAGKMLDQKSKEFGFN
ASTDVYEDLVKAGVIDPTKVVRAALQDASSVAGLLITTEAAVAELPEDKSSGGGMPDMGG
MGGMGGGMGF
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggctggtaaagacgtaaaatttggtcgtgacgcccgcgaacgcatccttaaaggtgta
aacacgctggctgatgccgttaaagtaaccctcggccctaaaggccgtaacgtggttctc
gacaaatcatttggcgcgccgcgcatcaccaaagacggtgtttcggttgccaaggaaatc
gaactgaaagacaagttcgaaaatatgggcgcgcagatgctccgcgaagttgcatcaaaa
accaatgatgttgctggcgacggcaccaccacggctacagtgcttgctcaggcgattgtc
aaagaaggcatgaagtctgtatctgccggcatgaacccgatggatctcaagcgcggcatt
gaccttgcggttgataaagttgtcgctgatctcaagaagcgttcgaaagacgtcaagggc
agcgaagaaatcgcacaggttggtattatttcagccaatggcgatgttgaagtcggtcag
aaaattgctgaagcgatggaaaaagtcggcaaagaaggcgtgatcacggttgaagaagcc
aaaggtctcgatttcgagctagacgttgttgaaggcatgcagtttgaccgcggttatctc
tcgccttacttcatcaccaatccggacaagatgattgcggacctcgaaaatccatacatc
ctgatccacgagaaaaaactcaccaacctgcagcctatgctcccgattctggaagctgtt
gtgcaagccggacggcctttgctgattatcgctgaagatattgaaggcgaagcgcttgct
actctggtcgtaaacaagctgcgcggcggtctgaaaattgcagcggtgaaagcacctggt
ttcggtgatcgccgcaaagcgatgctcgaagatatcgcgatcctcaccaaaggtgaaatg
atctccgaagatctcggcatcaagctggaaagcgttacactgggcatgcttggtgaagcc
aagaacgtcacgatcgacaaagacaacaccaccatcgtggacggtgctggcaagtcgaaa
gacatcaaggcgcgtgtggaagcgatccgtaaccagatcgaatcaaccacttccgattat
gacaaagaaaaactgcaagaacgtctggcgaaactcgctggcggtgttgctgtgatcaaa
gtcggcggcgcgaccgaaatcgaagtgaaagagaagaaagaccgtgtcgacgatgcgctg
cacgcaacccgtgctgctgttgaagaaggcattgtcccaggcggcggtgctgcgcttctc
tatgctacttcagcccttaaaggcttggaaggcatcaacgaagaccagacccgcggcatc
gacattgttcgtaaagcgctgcagtctcccgttcgccagattgctgaaaatgccggtttt
gacggcgcggttgttgctggcaaaatgctcgaccagaagagcaaggaattcggctttaac
gcatcaaccgatgtgtacgaagatcttgtgaaagctggcgtgatcgatccaaccaaggtt
gtgcgcgctgctttgcaggatgcgtcttcggttgccggtctgctgatcaccaccgaagca
gctgttgccgaactgccagaagacaagtcttctggcggcggcatgcctgacatgggcggc
atgggcggcatgggcggcggaatgggtttctaa
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