Parasphingorhabdus halotolerans: HF685_10270
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Entry
HF685_10270 CDS
T07423
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
phao
Parasphingorhabdus halotolerans
Brite
KEGG Orthology (KO) [BR:
phao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phao03016
]
HF685_10270
Enzymes [BR:
phao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HF685_10270
Transfer RNA biogenesis [BR:
phao03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HF685_10270
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QJB69615
UniProt:
A0A6H2DNS8
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All DBs
Position
complement(2090462..2091079)
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AA seq
205 aa
AA seq
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MAVYFHEEDLPLDVLANGPVAVDTETMGLQTLRDRLCLLQISDGGGDEHLVRFGPDSDYA
APNLKAVLADPTRVKLYHFARFDLAAIDHYMGVMAEPVFCTKIASRLIRTYTDRHGLKEL
VRELLGQDISKQQQSSDWGGPVLSEAQQDYAASDVRFLHRLKDELELRLAREGRTEMAQA
CFDFLPHRARLDVAGWPEVDIFAHA
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggccgtatatttccacgaagaagatttgccacttgatgtgttggcaaatggtccggta
gcagttgatacagaaacaatggggctgcaaacgctgcgggaccgtctttgcttgttgcaa
atttctgatggtggaggcgatgaacatctggtgcgtttcggacccgatagtgactatgca
gcgccgaatttaaaagccgttctcgctgatccgacgagagtgaaactttatcatttcgcg
cgtttcgatctcgcggcgatcgaccattatatgggcgtcatggcagaacccgtattctgc
actaaaatcgcttctcgcttgatccgcacctataccgaccggcatggtctcaaggaactg
gtgcgcgaacttttgggacaagatatatcaaagcagcaacaatcgagcgattggggcggg
ccagtattgagtgaagcgcagcaggattatgccgcttcggacgtccgctttttgcaccgc
ctgaaagatgaactggagcttcgtcttgctcgggaaggacggacggaaatggcgcaggcc
tgtttcgactttttgccgcaccgcgcgcgccttgatgttgcgggctggccagaagttgat
atttttgctcatgcctga
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