Parasphingorhabdus halotolerans: HF685_11670
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Entry
HF685_11670 CDS
T07423
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
phao
Parasphingorhabdus halotolerans
Pathway
phao03420
Nucleotide excision repair
phao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HF685_11670
03430 Mismatch repair
HF685_11670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phao03400
]
HF685_11670
Enzymes [BR:
phao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HF685_11670
DNA repair and recombination proteins [BR:
phao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HF685_11670
MMR (mismatch excision repair)
Other MMR factors
HF685_11670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
AAA_30
AAA_11
UvrD_C
HNH_repeat
T2SSE
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QJB69853
UniProt:
A0A6H2DPE4
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All DBs
Position
2367530..2369365
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AA seq
611 aa
AA seq
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MSDRIQTAADEAVRECLATNRSFALIAGAGSGKTTSLVDALGEVRKTHGETLRQNGQRVA
CITFTKRAVAVIGERLGFDDLYKVSTLHSFLWGEIGRFGDDIRDALINHRLPALIAKAAE
QDTGKETKTARKAREKVARLENELAGLPEVVSFSYDDAVFSDYLNGKMSHDDVIEIAGYL
FRERATFRRLIGARYPFIFVDEAQDTFVPIVEGINQTCAQPGLPIVGYFGDPWQQIYDGR
AGDFAPPEDGLSITKVENFRCSPQVIEFLNAFRADVQQVAAGPNADVEGSVEIKLVRAEA
PEGERKRYSDAQLDRALAAMDQAIEGWGWTDQPDIIRLFLVRQMIARRLKFSGLQQLFTG
QFASMRAQDDYESGDHHLLKPFLTVICPLIEAFQNNESRKIIDILRTSSPAYDPHGSNAD
RKLKDMIDQSQAQLKELVEHWEASSIKDVLTYCRDRELIPVSDRLAEQLDRAPRTEEFDE
ELHNEEKGDWLADGLFAMPTTELFAYRDFISENTPYSTQHGVKGEEYPNVLVVFDDIEAS
WNQYSFSKLLTPGTAGEPTEGQQERGRKLAYVCFSRAERNLKILFFTPEPEKTKAELIER
KLIQQEQISIA
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaccgcatccaaaccgccgcagatgaagcagtccgtgaatgccttgccacgaat
cgtagctttgcactgatcgcaggcgcaggttctggtaagaccacttctcttgttgacgcg
cttggtgaagttcggaaaacgcatggagagaccctccgccagaatggtcaacgggttgcc
tgcatcacattcacaaaacgagctgtcgcagttatcggagagcgactaggcttcgacgat
ctgtataaggtgtcaacgctccatagcttcctatggggcgagatcggcagatttggtgac
gacatccgagacgcgcttataaatcaccgattgcccgccttgattgccaaagctgctgag
caagacactggcaaagaaacgaagacagcccgcaaagcaagggagaaggttgctcgattg
gagaatgagctggctggcttgccagaggtcgtgtcattctcatacgatgatgctgttttc
agcgactatttgaatgggaaaatgagccatgatgatgttatcgaaatcgccggttacctt
ttccgcgagcgagcgactttccgccgattgattggtgctcgttatccattcatttttgtg
gatgaagctcaagatacgtttgtgcctatcgttgaaggcataaatcagacctgcgcgcag
cccggtttacccatagtcggttacttcggcgatccttggcagcagatttatgatggcagg
gcgggcgactttgcccctccagaagatgggttatcaatcaccaaggttgagaatttccgc
tgctctccgcaagtgatcgagtttttgaatgctttccgtgcagatgttcaacaggtagcg
gcgggtccaaatgccgatgtggaaggcagcgtagaaataaagttggtccgagcggaggca
cctgaaggagagcgcaagcgttactcagatgcacaactggaccgcgcattagctgctatg
gaccaggctatcgaaggctggggttggacagaccagcccgatattatccggctttttctg
gtccggcagatgattgctcggcgtttgaaattttctggattgcaacagctttttaccggg
caatttgcttcaatgcgcgctcaggacgattacgaatcaggtgaccaccaccttctaaag
ccatttctcacagttatttgcccgctgatcgaggcgtttcaaaataacgagagccgcaag
attatcgacattctaaggaccagtagcccagcatacgatccgcacggttccaacgctgac
cgcaaactgaaggatatgattgaccagtctcaagcccaactcaaagagctggtagaacat
tgggaagcgtcatcaatcaaagatgtgctgacgtattgccgtgatcgtgagctgatacca
gtatctgatcgactagctgagcaactcgatagagcgccccgaacggaagaattcgacgaa
gagttgcataatgaggagaagggagattggttggccgatggcctattcgctatgcccaca
acggagctgttcgcataccgtgatttcatttcggagaatacgccatatagcacgcagcat
ggcgtgaagggtgaggaatatccgaacgtccttgtcgtatttgatgatattgaagctagc
tggaatcaatacagtttctcaaagttattaacgccgggaactgcgggcgaaccaactgag
gggcagcaggagcgcggtcgcaaacttgcttatgtgtgtttttcacgtgcagaacggaat
ttgaagattctattttttacgcctgagccagaaaagacaaaggccgagctgatcgagaga
aagttaattcagcaagagcagatatccattgcttaa
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