Parasphingorhabdus halotolerans: HF685_13560
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Entry
HF685_13560 CDS
T07423
Name
(GenBank) alginate lyase family protein
KO
K20525
oligo-alginate lyase [EC:
4.2.2.26
]
Organism
phao
Parasphingorhabdus halotolerans
Brite
KEGG Orthology (KO) [BR:
phao00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
HF685_13560
Enzymes [BR:
phao01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.26 oligo-alginate lyase
HF685_13560
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GFIT
Motif
Pfam:
Hepar_II_III_C
Alginate_lyase
Alg17C_C
Motif
Other DBs
NCBI-ProteinID:
QJB70188
UniProt:
A0A6H2DPR2
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Position
2760581..2762773
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AA seq
730 aa
AA seq
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MRGSLLLITFLCTAYTAAAAETPTSSQVSSVVAANSLKTDMAPLFAQEVERSRKFLALMM
DAGVVVPVPKDPGGGYTHEQHKQNYTAIYQGGQLYKLTGEQKYADYVRDVLLAYAEIYPT
LGEHPARKDSQGSGRLFWQVLNDAMWMVDSIQGYEAIRDSLSEVDRKNIDDNLFRKAAEF
LSTGSAVTFSKIHNHATWATAGVGMTGYVLGEKELVDIALLGLDKNGETGFLRQSELLFS
PDGYYTEGPYYQRFALKPFVVFAGAIENNDPARKIFEHRDGILLKALRTTIQLTYDGYFF
PFNDAIRDKSLKTDELYHGVAVAYSKTRDPGLLSIAQWQGRTVLTDAGKLVANDLAAGKA
KPFPFQSMLLSDGREGDQGAVAVLRNGDSTSGQALIAKNSSQGMGHGHFDKLSWQYYDNG
HEIVSDYGAARFLNIEAKHGGRYLPENETWGKQTIAHNTLVVDGKSHFDGDAEAADKLAP
EQLHFSDKAGSQISTAKMTGAYPGVDFTRTLALLELDGLNHPLVADVMRVNGQGSHQYDM
PLHYNGHIMRVGFDLKSNVESRPVLGSDNGYQHIWVDATANPESADKAFVTWINDDRFYT
SRWIPQAGSEAILAESGANDPEFNLRREQMIVQRVKAAGGSVFASVLEAHGRYDGAAERT
TDSDSQIKSIQHTRDGDVDLLLIETLTGEKSVLAISYDQDETKKHNAMINGTKVNWTGFA
DHIRLGGGSQ
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgagagggtcgcttctcttaatcacatttctatgcaccgcatatacggccgctgctgct
gaaaccccaacctcctcccaggtgagttcagttgtagcggccaactcattgaaaacggat
atggcgccactattcgcacaagaagtcgagcgctccagaaaattcttggcgctgatgatg
gatgccggcgttgtcgtgccagtcccaaaagatccaggcggcggttacacccacgaacag
cataagcaaaattacacggccatctatcagggtggacagctttacaagctaaccggcgaa
cagaaatatgccgactatgtacgtgatgttttgcttgcttatgctgaaatctatccaaca
ttaggcgagcatcctgctcgcaaagatagtcagggttcggggcggcttttctggcaggtg
ctgaacgacgcgatgtggatggtagatagcattcagggatatgaagctattcgcgatagc
ctctctgaagttgaccgcaaaaatatcgacgataatctgttccgcaaggcggcagagttt
ctctctactggctcggcagtgacatttagcaaaattcacaaccatgcgacatgggcgacg
gctggcgttggcatgacaggctatgttttgggtgaaaaggaactggtcgatatcgctctg
cttggactcgacaaaaacggagagaccgggtttttacgccaaagcgaactgctcttttcg
cccgatggctattataccgaaggcccctattatcagcggtttgcgctaaagccctttgtg
gtttttgcgggtgcgattgaaaataacgatccggcccgcaagattttcgagcatcgcgac
ggcattttgctcaaggcgctgcgcaccactatccagctgacctatgacgggtattttttc
ccgtttaacgatgcgatccgggataaaagtctgaaaaccgacgaactgtatcacggcgtc
gcggttgcctatagcaagacacgggaccccggattgctgtctatcgcgcaatggcaagga
cgcacggtgctgactgatgctggcaagctggttgcgaatgatctggccgccggcaaggcg
aaaccatttcctttccaatccatgttgctcagtgatggccgcgaaggcgatcagggtgca
gtcgcagtcctgcgcaatggtgatagcacaagcgggcaggcgctgattgccaagaatagc
tcgcagggcatggggcatggccatttcgataagttaagctggcaatattatgacaatggc
catgaaattgtcagcgactatggcgcggcgcggtttttgaatatcgaggccaagcacggc
ggtcgttatctccccgaaaacgagacttggggtaaacagacgatcgcgcataatacgctc
gtagttgatgggaaaagccactttgatggtgatgccgaagcagcagataaattagcgccc
gagcagttacatttttctgacaaggcggggagccagatcagtactgcgaaaatgaccggt
gcttatcccggagtagattttacccgcaccctggcgctgcttgagctggatgggttgaac
catccgttggttgcagacgtaatgcgggtgaatggccagggaagccatcaatatgacatg
ccgcttcactataacggccatatcatgcgggtaggatttgatctgaagtccaatgttgaa
agtcggccagtgctgggcagcgacaatggttatcagcacatctgggtcgatgccacagcc
aatcctgaaagcgccgacaaggcctttgttacatggatcaacgatgatcggttctatacg
tcgcgctggattccgcaggcgggcagcgaagcgatattggccgaaagtggtgccaatgat
cccgagttcaatctccgccgcgagcaaatgattgtccagcgggtcaaggcagcgggaggt
tcagtctttgcaagtgtgctggaggcccatggccgttatgatggcgcagcggagcggacg
acggatagtgacagccagattaagtccattcaacatacgcgcgatggcgacgtggatctg
ctgctaatcgaaacactgacgggcgaaaaatcggtgctcgcgatttcctatgatcaggat
gagaccaaaaaacataatgccatgataaatggcacgaaagtcaactggacaggcttcgca
gatcacatccggttgggtggaggttcccaatga
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