Parasphingorhabdus halotolerans: HF685_14235
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Entry
HF685_14235 CDS
T07423
Name
(GenBank) DUF4130 domain-containing protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
phao
Parasphingorhabdus halotolerans
Pathway
phao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HF685_14235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phao03400
]
HF685_14235
Enzymes [BR:
phao01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HF685_14235
DNA repair and recombination proteins [BR:
phao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HF685_14235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
DUF1509
DUF2026
Motif
Other DBs
NCBI-ProteinID:
QJB70291
UniProt:
A0A6H2DRA4
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All DBs
Position
2895452..2896471
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AA seq
339 aa
AA seq
DB search
MTYSVADMPADCSSSLTPTEQYRIEVKNETDIAGWREEARTLLVNNIPPEQLDWTVRSRA
NNSQFDFGVAEPPKLSTAAGTSDFRVAKECLRLINTALLHRNEDRFDLAYRLLFRMRHAP
KIYQNPADSDGKRLSAYAKSVRRDIHKMHAFVRFRKTGLRENREQFIAWFEPDHHIVEAV
GPFFRNRFTGMDWIIVTPEASLSWDGKSLINGPGGCKQDVPTDDAVEQEWSTYYRNIFNP
ARLKTRAMKSEMPVKYWHNLPETALIPSLIKKSGAMVQQMMEKEEQQLVLGDEATVEHRT
KPASLEALNAEMATHTRSISENSAVNAVFGEGHGMPASC
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
ttgacctattcagtagctgacatgcctgcagactgttcatcatcattaacgccgaccgaa
caatatcgtattgaagtgaaaaacgaaactgacattgcgggctggcgagaggaagcgcgc
acgctgttagttaataatataccgccggaacagctcgactggacagtgcggagccgagcg
aacaatagccagtttgattttggcgtggccgagccgccaaaattatcaacagcagctggc
acgtccgattttcgtgtcgccaaagaatgtctgcggctgatcaataccgcgttgctgcac
cgcaatgaggatcggtttgatctcgcataccgcttgctgttccggatgcgccacgcgccc
aaaatttatcaaaatccggcggacagcgatgggaaacgcctatccgcctacgccaaatcg
gtgcggcgcgatattcacaaaatgcatgcctttgtccggtttcggaaaacaggactccgt
gaaaaccgtgaacaatttatcgcatggtttgagccagaccatcatattgtcgaagccgtc
ggccctttcttccgtaaccgtttcaccgggatggactggatcatcgttacgcccgaagcc
agcctttcttgggatggaaagtctttgattaatggtccgggtggctgcaagcaggatgtg
ccgacggacgatgcagtagagcaggaatggtccacttattaccgcaatattttcaatccg
gcccgattgaaaacgcgggcgatgaaatccgagatgccggtcaaatactggcataacttg
ccggagacagcgctcattccatcgctgatcaaaaagtctggagcaatggttcagcagatg
atggagaaagaagagcagcaactcgtgctgggcgatgaagcgactgttgaacaccgcacc
aagccggcgtcgctcgaagcgctgaatgcagaaatggctacgcatacccgatcaatcagc
gagaactctgctgttaacgcggtcttcggtgagggccatgggatgcccgcatcatgctga
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