Peptoniphilus harei: NCTC13077_00260
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Entry
NCTC13077_00260 CDS
T05838
Symbol
nrdD
Name
(GenBank) Anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
phar
Peptoniphilus harei
Pathway
phar00230
Purine metabolism
phar00240
Pyrimidine metabolism
phar01100
Metabolic pathways
phar01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
phar00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
NCTC13077_00260 (nrdD)
00240 Pyrimidine metabolism
NCTC13077_00260 (nrdD)
Enzymes [BR:
phar01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
NCTC13077_00260 (nrdD)
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GFIT
Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
VEJ33518
LinkDB
All DBs
Position
1:complement(280433..282556)
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AA seq
707 aa
AA seq
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MLQVIKRNGKKVDFDKDKIVIAIEKAMHSSSGVYIEGQALEIANEIEKLAGEKDLPLSIY
DIEGEVYYRLIQNDNPATARAYESYKSVQQFKREQNTTDDDILGLLNETNEDLMDENSNK
NAVIASTQRDLIAGEVSKDIAKRKMIPGDLVEAHESGAIHIHDMDYFIQPIFNCCLVNMK
DMLDNGTVVNGKMIETPKSFQVACNVMTQIIAQIASNQYGGQSINISCLGKYLRRSYEKN
LSLALDTLGDIELAEKMANQMTKKDLESGIQTIQYQINTLMTSNGQAPFVTLFMWLEDDD
QYVDEVAMIIEEILKQRIQGIKNDAGVYVTPAFPKLIYVLDENNINKDSKYYYLTSLAIR
CTAKRMYPDYISAKKMRANYEGSVFSPMGCRAFLPPYKDEKGNYKFEGRFNMGACSINLP
QIGILAGGSEEKFFEILEKRLDLVKRVGLLRYEHLKKVNSDSSPIHWQHGAIARLGKHEP
IAPLLENGYSTVSLGYIGIYEATMLIKGVSHTDKKGYDFAMRIMDALNDAVKKWTEEYGI
KFTLYATPAESLTQRFANIDKERFGIIENVTDKGYYINSFHVDVREEISAFEKFNFEAKF
QDKSTGGCISYVEIPNMGHNLEALETIVRYIYDNIQYAEFNTKSDYCAECGFDGEIKLND
HGDWECPQCHNTDRSSLTVVRRTCGYLGENFWNEGRTKEINARVLHI
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgttacaagttatcaagagaaacggcaaaaaagttgactttgacaaggataaaattgta
attgccattgaaaaggcaatgcactcgagttctggtgtctacatagaaggtcaagctctt
gaaattgcaaatgaaatcgaaaagttggcaggagaaaaagaccttcccctttctatttat
gacatagaaggagaagtttattaccgtttgattcaaaacgacaacccagctactgctagg
gcctatgaatcttacaagtctgttcaacaatttaagcgcgaacaaaacactactgatgat
gatattcttggtctcttaaacgaaacaaacgaagacctaatggacgaaaactccaacaaa
aatgctgttattgcctctactcaaagagacctaatagcaggagaagtttcaaaggatatt
gccaagagaaagatgattccaggagacttagtagaagcacacgaatctggtgccatccac
atccacgacatggactacttcatccaaccaattttcaactgctgcctagttaacatgaag
gacatgcttgacaatggaactgttgtcaatggcaagatgattgaaactccaaagtccttt
caagttgcctgcaatgttatgacacaaatcattgcacaaattgcatcaaaccaatatggt
ggccaaagtattaatatttcctgtcttggcaagtacctaagaagatcttacgaaaagaac
ctttctcttgcccttgacactcttggagatattgaacttgcagagaaaatggcaaatcaa
atgactaagaaggaccttgaaagtggaatccaaacaatccaatatcaaataaatactttg
atgacttccaacggtcaagcacctttcgttaccttattcatgtggcttgaggacgacgac
caatatgttgacgaagttgcaatgataatcgaagaaatcttaaagcaaagaattcaagga
atcaaaaatgacgcaggtgtttatgttacaccagcctttcctaagctaatttacgttctt
gatgaaaataacatcaacaaggactcaaaatattattatttaacatctcttgcaattagg
tgtacagctaagaggatgtaccctgactacatttctgccaagaagatgcgtgccaactac
gaaggcagcgtattttctccaatgggatgcagggccttccttccaccttacaaggatgaa
aagggcaactacaagttcgaaggaagattcaacatgggagcttgctccatcaaccttcca
caaataggaattcttgcaggaggaagcgaagaaaaattctttgaaatcctagaaaaaaga
ctagaccttgttaagagggttgggctattgcgttacgaacacctaaagaaggtaaacagt
gactcatcaccaatccactggcaacacggtgccattgcaagacttggcaagcatgaacct
attgcacctctacttgaaaatggatactcaacagtttcccttggctacattggaatttat
gaagcgacaatgcttattaagggagtgagccacacagacaagaagggctacgactttgcc
atgaggatcatggacgcccttaatgatgctgtcaagaagtggactgaagaatatggaatt
aagtttactctttacgcaacgccagctgagtcacttacacaaagatttgccaacatcgac
aaggaaagatttggaatcatagaaaatgtaactgacaagggttactacatcaactccttc
cacgttgacgttcgtgaagaaatttctgcctttgaaaagtttaacttcgaggcaaaattc
caagacaagtcaactggcggctgcatatcctatgtagaaattccaaacatgggccacaac
cttgaagccctagagacaattgtcagatatatttacgacaacatccaatacgcagaattt
aatacaaagtcagactattgtgcagaatgtggctttgacggtgaaatcaaattaaacgac
catggcgactgggaatgcccacaatgccacaacacagacaggtcaagccttacagtggta
agacgtacttgtggttaccttggtgaaaacttctggaacgaaggtcgtactaaggaaatc
aacgcaagggttcttcacatctaa
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