Peptoniphilus harei: NCTC13077_00578
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Entry
NCTC13077_00578 CDS
T05838
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
phar
Peptoniphilus harei
Brite
KEGG Orthology (KO) [BR:
phar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phar03400
]
NCTC13077_00578
DNA repair and recombination proteins [BR:
phar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NCTC13077_00578
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
Zn_ribbon_LapB
ATPase
DnaB_C
ChlI
AAA
AAA_30
nSTAND3
AAA_22
KdpD
AAA_16
NTPase_1
NPHP3_N
AAA_31
Lon_C
AAA_19
DUF7129
SLFN-g3_helicase
YqeC
ATPase_2
MeaB
NACHT
AAA_14
TK
CbiA
RUBY_RBDX
Viral_helicase1
RNA_helicase
TadZ-like_ARD
DUF7130
AAA_11
Motif
Other DBs
NCBI-ProteinID:
VEJ33844
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All DBs
Position
1:605387..606766
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AA seq
459 aa
AA seq
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MKKKTVYQCNKCGYISHGFFGKCPNCGAWNTLEEKEEETSSSKSSSRSKKVKKDAQKLNT
VAVSSDERVKTSIEEFNRVMGGGIVRDSVSILTAKPGSGKSTLLMQVANDIANKGMRVLY
ASGEESETQIKMRAERILDKLSDNIWVYSVTSLNSVLDQVEKIDPQLIIIDSIQTFTLDE
FPQRPGTPTQTMECAYKMTEVAKDLEKPRMVFLVGQMTKQDELAGVRSLEHLVDTVLLID
GDSSEDLRSLMTTKNRYGSTGEIGFFSMTEKGMISIDNPSEYFMTKRSASEQVPGSSLSV
IREGTRPIILETEALASKSFLPYPSRISESVRREHLNTLVSILEERAGITFLDKNIVVKS
TGGIKVKEQASNLSVMVSIVSSTLNKPVEANSVFIADVGLTGELKNVPSLDIRLKEAERM
GFKKAYVSKYSNVKEEAYKDLKVIKMSNISEVLNKIFDI
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaaaacagtctatcaatgtaataaatgtggctacatttcccatggttttttt
gggaagtgtcccaactgtggtgcatggaatactctagaagagaaggaagaagaaacatct
tctagcaaaagctcttctagatctaaaaaagttaaaaaggatgcacaaaaattaaatact
gttgcagtttcttcagatgagagggtcaagactagcatagaagaatttaacagggtcatg
ggcggcgggatcgtccgtgattctgttagtattttgactgcaaagccaggctcaggtaag
tcaacccttcttatgcaagttgccaatgatattgctaacaaggggatgagggtcctctac
gcatcgggagaagaatcagaaacacaaattaagatgagggcagagagaattcttgacaaa
ctttctgacaatatttgggtttattctgtaacttcacttaactcagtccttgatcaggtg
gaaaaaattgatccacaactaataatcatagactcaattcaaacttttacacttgatgaa
tttccacaaagaccaggaactccgacccaaactatggagtgtgcctataagatgactgaa
gttgccaaagacttagaaaagcctcgcatggtcttcttagttggacaaatgactaagcaa
gatgaacttgcaggtgtgagaagtcttgaacacttggtggatacagttctcttaattgac
ggcgattcatcagaagacttgagatcacttatgactacaaaaaataggtacggatcaaca
ggtgaaattggatttttctccatgacagaaaagggcatgatttcaattgacaacccatcg
gaatattttatgacgaagaggtcggcatcagaacaagtgccaggctcttcactctcagtc
attagagaaggaacaagaccaataattcttgagacagaagccttagcctcaaagtctttc
ttaccttatccatcaagaatttctgaatctgtaaggcgtgaacacctaaatactcttgtt
tcaattcttgaagagagggcaggaattacttttttagacaagaacatagttgtcaagtca
acgggtggaattaaagttaaggagcaggcatcaaacctatctgtaatggtttctattgtg
tcgtcaacacttaataagcctgtcgaagctaactcagttttcattgccgatgtgggactt
actggagagctaaaaaatgttccaagtcttgatataagactcaaggaagcagagaggatg
ggttttaaaaaggcctatgtatcaaaatattccaatgtgaaggaagaagcctacaaggac
ttaaaagttattaagatgtcaaatatctctgaagtcctaaataaaatatttgatatataa
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