Peptoniphilus harei: NCTC13077_00895
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Entry
NCTC13077_00895 CDS
T05838
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
phar
Peptoniphilus harei
Pathway
phar03420
Nucleotide excision repair
phar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC13077_00895 (pcrA)
03430 Mismatch repair
NCTC13077_00895 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phar03400
]
NCTC13077_00895 (pcrA)
Enzymes [BR:
phar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC13077_00895 (pcrA)
DNA repair and recombination proteins [BR:
phar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC13077_00895 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NCTC13077_00895 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
Viral_helicase1
UvrD_C_2
AAA_30
AAA_11
ResIII
PhoH
Motif
Other DBs
NCBI-ProteinID:
VEJ34172
LinkDB
All DBs
Position
1:complement(943989..946193)
Genome browser
AA seq
734 aa
AA seq
DB search
MDINTLNDKQKEALLATEGPLLILAGAGSGKTKVVTSKIAYLIEELQVSSWRILAITFTN
KAANEMRERVANLIDEDISSMWIGTFHSICVRILRKNIDKIGYSSSFTIYDRDDQITVVK
EAVAELGLDRDIYKPRSLVNDISNIKSEGLSPKEYMDLNKSNFFKENLGKIYEIYEKKLA
NNNALDFDDLLIKTVDILRDYEEVREFYIDKFQYIFVDEYQDTNKIQYEFIKLVAGKDPN
LTVVGDNDQSIYKWRGADINNILNFHKDFPGAKIVKLEQNYRSTQKILEVANKVIENNSS
RIDKNLWTSRNEGKDVVYREFPHSNEEEYGVINKIIGLHYKGEEFKDMAILYRTNAQSRG
FEEALVRERIPYKIVGGLKFYDRMEVKDVLAYLRILNNTDDNVSLARIINRPKRGIGDTS
LSDMLDFADNNGLSLYNVVTNIDKFEDLNIRARKNVREFGNILKILKDRADKLSIGKLFE
EVLYESGYVEDLKNQNTIEAKTRLENIEELHSNIMEYDREGVELAEYLNTLSLLSDVDKT
SEDSGVNLMTMHAAKGLEFSTVFLVGLEEGLFPSSRSMESEEEVEEERRLCYVGVTRACN
NLFISSSRTRSMYGKLTPAKRSRFIGEMGDKIEIIEDKSRELLEVRDYNEGNKSSVNRKN
KFFGMEKKTETKKAVPKSMDKNINVGDKVKHKLFGKGMVVQKKEKNGDYEVVISFDKKGL
KRLMLSVAPIKLID
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggatataaatacactaaatgataaacagaaagaagctcttttggcaacagaaggtcct
ttacttattttagcaggagctggaagtggcaaaaccaaagtagttacttctaaaattgca
tatttaattgaagaattacaagtttcatcatggaggattttggctattacctttacaaat
aaggctgccaatgagatgagagagagagttgcaaatttaatcgatgaagacatctcctca
atgtggattggaacttttcactcaatttgcgttaggatacttagaaaaaacattgataag
ataggttacagctcaagctttactatttacgacagggacgaccaaattactgttgtaaaa
gaagctgttgctgaacttggacttgatagggatatttataaaccgagatctcttgtaaat
gatatttctaatataaagagtgaaggccttagtcctaaagaatatatggatttaaataaa
agcaactttttcaaagaaaatcttgggaaaatttatgagatttatgaaaaaaagttagca
aataataatgccttagactttgatgaccttttaataaagacagttgatattttaagagat
tatgaagaggttagggaattttatatagataagttccagtatatatttgttgatgaatac
caagatacaaataaaatacagtatgagtttataaaattagttgcgggaaaggatccaaac
ttaacagttgtaggggataatgaccaatctatttataagtggcgtggagctgatataaat
aatattttaaatttccacaaagatttccctggtgcaaaaattgtaaaactagagcaaaat
tatagatcaactcaaaaaattcttgaagtagctaataaggtaatagaaaacaactcatct
aggattgataaaaacctttggacttcaaggaatgaaggtaaagatgttgtatatagagaa
tttcctcattcaaatgaagaagaatatggtgtaataaataagataattggacttcactac
aagggtgaagagtttaaagacatggctattttatatagaaccaacgctcagtcaagagga
tttgaagaggccctagtcagagaaaggataccttataagattgtcggtggcttaaaattc
tacgatagaatggaagtcaaggatgttttagcttacctaagaattttaaataacactgat
gacaatgtaagcttagctagaattataaataggccgaagagagggataggagatacatct
ctatctgatatgttagactttgctgataacaatggtctgtccctttacaatgtggttact
aatattgataagtttgaagatttaaatattagagcaagaaaaaatgtaagggaatttggc
aatatcttaaagattttaaaggatagggcagataaactttcaataggtaagctatttgaa
gaagttctctatgaaagtggttatgtagaagatttaaaaaatcaaaatacaattgaagct
aagactaggctcgaaaatattgaagaactccattccaatataatggaatatgacagggaa
ggcgttgaacttgccgaatacttaaataccctatctctactttcagatgttgataaaaca
tctgaagatagtggagtaaatcttatgactatgcatgcagctaaagggcttgaattttct
acggtattcttagtcggcctagaggaaggtctcttcccaagcagcaggtctatggaaagt
gaagaggaagttgaggaagaaagaagactttgttatgtaggagttacaagagcttgcaac
aatctatttatctcatcttctcgaactaggtctatgtatggaaagttgactccagcaaaa
agaagtagatttatcggtgaaatgggcgacaagatagaaattattgaagataagtctaga
gaattactagaagttcgtgattataatgaaggaaataagtcttcagttaatagaaaaaat
aaattctttggaatggaaaagaaaactgaaacaaagaaggctgttcctaagtccatggat
aaaaatatcaatgttggagataaggtaaagcacaaattatttggcaagggcatggtagtg
caaaagaaagaaaaaaatggagactacgaagttgttatttcctttgacaaaaagggttta
aagaggcttatgctttcagttgctcctattaaattaatagattag
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