Peptoniphilus harei: NCTC13077_00927
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Entry
NCTC13077_00927 CDS
T05838
Symbol
dnaX_2
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
phar
Peptoniphilus harei
Pathway
phar03030
DNA replication
phar03430
Mismatch repair
phar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC13077_00927 (dnaX_2)
03430 Mismatch repair
NCTC13077_00927 (dnaX_2)
03440 Homologous recombination
NCTC13077_00927 (dnaX_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phar03032
]
NCTC13077_00927 (dnaX_2)
03400 DNA repair and recombination proteins [BR:
phar03400
]
NCTC13077_00927 (dnaX_2)
Enzymes [BR:
phar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC13077_00927 (dnaX_2)
DNA replication proteins [BR:
phar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC13077_00927 (dnaX_2)
DNA repair and recombination proteins [BR:
phar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC13077_00927 (dnaX_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
DNA_pol3_delta_C
AAA_5
DnaX_C
AAA_22
AAA_2
AAA_assoc_2
AAA_30
RuvB_N
AAA_18
AAA_19
Motif
Other DBs
NCBI-ProteinID:
VEJ34234
LinkDB
All DBs
Position
1:complement(979097..980827)
Genome browser
AA seq
576 aa
AA seq
DB search
MYKALYRKYRSKTFDELYGQEAVVASLKNQVENNEISHAYIFQGTRGTGKTSAAKILSRA
VNCLHPVDGNPCNECENCKRILNESVLDVVEMDAASNNGVDDIRDLKDKVIYPPQALKYK
VYIIDEVHMLSKGAFNALLKILEEPPRHLIFILATTEIEKIPATILSRSQKFNFKRISVE
DIESNLKRITELEGKSCDEEVFTLIAKTADGAMRDALSVLDQLLTKNEDHIKLEDAMEVL
GISSSELLFSLSKAMIEKNINGSLYAIDEIYREGIDFNTLSSQILNHFRDILLVKTLKDP
RKIVYTTYLKEFQNLAGSVELEDLLNIIEILKELSFEIKYADNKRVVFEMNAIKICKRSN
KDDLEGRIKSLEDKINNLGRDIPSNSNSNISSNNIEDNFNNYEDNYYDYNPGDFYKADVA
PNKEKNSKSFVGNNRENINGDESSRIEKSKQSAIIENDNTKNLEEKKDKTNNITIDRIKS
DWDKIINELISRGFKGFAGFVGHARPVSLNGNTLEIVFEEKDSLFYEYCMMQENKKVLPD
LLNNVYNTNIDVRMKLKKGGVDKLEEIFGKDNIEEI
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtataaagctttatatagaaaatacaggtcaaagacctttgatgagctttacggccaa
gaggctgtagtagcttcattaaaaaatcaagtagaaaacaatgaaataagtcatgcctat
atatttcaaggtactaggggaacaggaaagacatctgctgccaaaattttatcaagagca
gttaattgccttcaccctgtcgatgggaacccttgtaatgaatgtgagaattgcaagaga
attttaaatgaatctgtcttagatgttgttgagatggatgctgccagcaataatggtgta
gatgatattagagacttaaaggacaaggtaatttaccctcctcaagctcttaaatataag
gtctatattattgacgaggttcacatgctatcaaagggggcctttaatgccttacttaaa
attttagaagagccaccaagacatcttatttttattttagcaacaacagaaatagaaaaa
attcctgcaactattttatcaaggtctcaaaaatttaattttaagagaatatctgttgag
gatattgaaagtaatttaaagagaataactgagcttgaagggaaatcttgtgatgaagaa
gtctttaccctaattgcaaaaacagctgacggagcaatgagagatgctctatcagttttg
gatcagcttctcacaaaaaatgaagaccacattaaacttgaagatgccatggaggttctt
gggatatcatcttcagaattattattttctctatcgaaagcaatgattgaaaaaaatata
aacgggtcactctatgctattgatgaaatctatagagaaggtattgacttcaatacactt
tcttcacaaatcttaaatcattttagagatatattattggtaaaaaccttaaaggatcca
agaaaaattgtttacactacttacttaaaggaatttcaaaatctggcaggaagtgttgag
ctagaagaccttctaaatataatagaaatattaaaagagctttcttttgaaattaagtat
gctgacaacaagagagttgtcttcgagatgaatgcaattaagatttgcaaaaggtctaat
aaagatgatttagaaggaagaattaaatccttagaggacaagattaataatttgggaagg
gatattccatctaattctaattccaatatttcatcaaataatattgaagacaatttcaat
aactatgaagataattattatgattataatccaggagatttttataaggcagatgtggct
cctaataaagaaaaaaacagcaagtcttttgtgggaaataatagagaaaacatcaatggt
gatgaaagctctagaattgaaaaatcaaagcaatctgctataattgaaaatgataatact
aaaaatcttgaggaaaaaaaggataagaccaataatattacaattgataggataaaatca
gattgggacaagataataaatgaacttatctctagaggttttaagggctttgctggtttt
gtaggacatgcaagaccagttagtttaaatggtaatacattggaaatagtatttgaagaa
aaggatagcttattttacgaatactgcatgatgcaggaaaataagaaggttttgcctgac
ctactaaataatgtttataatacaaatattgatgttaggatgaagttaaaaaaaggtgga
gtagataagctagaagagatttttggaaaagataatatagaagaaatttag
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