Phyllostomus hastatus (greater spear-nosed bat): 123806083
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Entry
123806083 CDS
T07912
Symbol
DHX38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
phas
Phyllostomus hastatus (greater spear-nosed bat)
Pathway
phas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123806083 (DHX38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phas03041
]
123806083 (DHX38)
Enzymes [BR:
phas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123806083 (DHX38)
Spliceosome [BR:
phas03041
]
Complex C
Other components
Step II factors
123806083 (DHX38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
T2SSE
nSTAND3
PhoH
Flavi_DEAD
AAA_30
Microtub_bd
AAA_16
AAA_7
Motif
Other DBs
NCBI-GeneID:
123806083
NCBI-ProteinID:
XP_045675050
LinkDB
All DBs
Position
Unknown
AA seq
1225 aa
AA seq
DB search
MADTNEDTSIHRLEGTDGDSQVGGLICKTKSAASEQHVFKAPAPRPSLLGLDLLASMKRR
EREEKDDGEDKKKSRISSYKDWEESKDDQRDAEEDGSDQSGRSIRKDRHYRSARVETPSH
PGGVSEEFWERSRQRERERREHGVYASSKEEKDRKKERSRDRDSDRKRDRDERDRSRHSS
RSEREGGSERSRRNEPESPRHRPKDAATPSRSTWEEEDNYGSSRRSQWESPSPTPSYRDS
ERSHRLSSRDRDRSVRSRYSDDTPLPTPSYKYNEWADDRRHLGSTPRLSRGRARREDGEE
GISFDTEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEDYVRRREQHLHKQKQKR
ISAQRRQINEDNERWETNRMLTSGVVHRLEVDEDFEEDSAAKVHLMVHNLVPPFLDGRIV
FTKQPEPVIPVKDATSDLAIIARKGSQTVRKHREQKECKKAQHKHWELAGTKLGDIMGVK
KEEEPDKALTEDGKVDYRTEQKFANHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQELL
TIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMG
GNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTD
VLFGLLREVVARRSDLKLIVTSATMDADKFAAFFGNVPIFHIPGRTFPVDILFSKTPQED
YVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQL
PSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQI
YPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLG
VQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVS
CDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNN
YSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAA
KLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLA
ELGPMFYSVKQAGKSRQENRRRAKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVRST
KIYTPGRKEQGEPMTPRRTPARFGL
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccaatgaggatacctcgatccacagattggaaggcactgatggggactct
caggttggtggtcttatttgcaagaccaaaagtgcagccagtgagcagcatgtcttcaag
gcccctgctccccgaccttcattgctgggactggacttgttggcttccatgaaacggagg
gagcgagaggagaaagacgatggggaagacaagaagaagtccagaatctcttcatacaag
gactgggaagagagcaaggatgaccagagggatgctgaggaggatggcagtgaccagtct
ggtcgaagtatccgaaaagacagacattatcgatctgctcgggtagagactccatcccat
cctggtggtgtgagtgaagagttttgggaacgtagtcggcagagagagcgggagcgccgg
gaacatggtgtctatgcctcgtccaaagaagaaaaggatcgaaagaaggagagatcgcgg
gaccgagactctgaccgcaagagagacagagatgagcgggacagaagcaggcacagcagc
agatcggagcgggaaggagggtcagagcgcagtaggagaaatgaaccagagagcccgcga
caccgacctaaagatgcagccaccccttcaaggtctacctgggaggaagaggacaactat
ggctcctcaaggcgctcgcagtgggaatcgccctccccaacaccttcctatcgggattct
gagcggagccatcggctgtccagccgagatcgggataggtctgtgaggagcaggtactca
gacgacacacctttgccaacaccatcctacaagtacaatgagtgggctgatgacagaaga
cacctagggtccactccgcgtttgtccaggggccgagcaagacgtgaggatggtgaagaa
ggaatttcatttgacacagaagaggagcggcagcaatgggaggatgaccagaggcaagct
gaccgggattggtacatgatggatgaaggatatgacgaattccacaatcccctggcctac
tcctccgaggactacgtgaggaggcgggagcagcatctgcataaacagaagcagaagcgc
atttcagctcagcggagacagatcaatgaggataacgagcgctgggagaccaaccgcatg
ctcaccagcggcgtggtccatcggctagaggtggacgaggactttgaagaggatagtgca
gccaaggtgcatctgatggtgcataacctggtgcctcccttcctggacgggcgcattgtc
ttcaccaagcagccagagcctgtgattccagtcaaggatgccacttctgacctggccatc
attgctcgaaaaggcagccaaacagtgcggaagcacagggagcaaaaggaatgcaagaag
gctcagcacaaacattgggaactggctggaaccaaactgggagatataatgggggtcaaa
aaagaggaagagccagataaagcactgacagaagatggtaaagtggactataggacagag
cagaagtttgcaaatcacatgaagaaaaagagcgaagccagcagcgaattcgcaaagaag
aagtcgattctggagcagaggcagtacctgcccatctttgctgtgcagcaggaactactc
actattattagagataacagcattgtgatcgtggttggggagacggggagtggtaagacc
actcagctgacccagtacttgcatgaagacggttacacagactacgggatgattgggtgc
acccagccccggcgtgtggcggccatgtcagtggccaagagagtcagtgaagagatgggg
ggaaaccttggtgaggaggtgggttatgccattcgcttcgaagactgcacttcagaaaac
accttgatcaaatacatgactgatgggatcctgctccgagagtccctccgggaggcggac
ctggatcactacagcgccatcatcatggatgaggcacacgaacgctccctcaacaccgat
gtgctcttcgggctgctccgggaggtggtggctcggcgctcagacctgaagctcattgtc
acatcggccacaatggatgcagataaatttgctgccttttttgggaatgttcccatcttc
cacatccctggtcgtaccttccctgttgacatcctcttcagcaagaccccacaggaggat
tacgtggaggccgcagtgaagcagtccttgcaggtgcacctgtcaggggcccctggggac
atcctcatcttcatgcctggccaggaggacatagaggtgacctcagaccagattgtggaa
catctggaagaactagagaatgcacccgccttggctgtgctgcccatttactcccagctg
ccttctgacttgcaggccaaaatcttccagaaggctccggatggcgttcggaagtgtatc
gttgccaccaacattgctgagacatctctgactgtcgatggcatcatgtttgttatcgat
tctggttattgcaaattaaaggtcttcaaccccaggattggcatggatgctctgcagatc
taccccatcagccaggccaatgccaaccagaggtcggggcgagccggcaggacgggccca
ggtcagtgtttcaggctctacacccagagcgcctataagaatgagctcctgaccaccacg
gtgccggagatccagaggaccaacctggccaatgtggtgctgctgctcaagtccctgggg
gtgcaggacctgctgcagttccacttcatggacccgcccccagaggacaacatgctcaac
tccatgtaccagctctggatcctcggagccctggacaacacaggtggtctgacctcaact
gggcggctgatggtggagttcccgctggacccagccctgtccaagatgctcattgtatca
tgtgacatgggctgcagctctgagatcctgctcattgtctccatgctctcggtcccagcc
atcttctacaggcccaagggccgagaggaggagagtgatcaaatccgggagaaatttgct
gtccccgagagtgatcatttgacctacctgaatgtttatctgcagtggaagaataataat
tactctaccatctggtgtaatgatcattttatccatgccaaagccatgcggaaggtccgg
gaggtgcgggctcagctcaaggacatcatggtacagcagaggatgagcctggcctcatgt
ggcaccgactgggacatcgtcaggaaatgtatctgtgctgcctatttccaccaggcggca
aagctcaagggaatcggggagtacgtgaatatccggacggggatgccctgccatttgcac
cccaccagctccctctttggaatgggctataccccagactacatagtgtaccacgagttg
gtcatgaccaccaaggagtacatgcagtgcgtgactgctgtggacggagagtggctggcg
gagctgggccccatgttctacagcgtgaaacaggcaggaaagtctcggcaggagaaccgc
cgacgggccaaagaggaagcctctgccatggaggaagagatggcgctggctgaggagcag
ctgcgagcccggcggcaggagcaggaaaagcgcagccccctgggcagtgtcaggtctaca
aagatctacactcctggtcgaaaggagcaaggggagcccatgactcctcgccgcacgcca
gcccgctttggactatga
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integrated database retrieval system
