Phyllostomus hastatus (greater spear-nosed bat): 123806413
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Entry
123806413 CDS
T07912
Symbol
TRIM50
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50 isoform X1
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
phas
Phyllostomus hastatus (greater spear-nosed bat)
Brite
KEGG Orthology (KO) [BR:
phas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phas04121
]
123806413 (TRIM50)
Ubiquitin system [BR:
phas04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
123806413 (TRIM50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_2
RING_XB3-XBAT31
zf-RING_5
zf-Nse
TRIM_CC
U-box
Prok-RING_4
zf-RING_4
zf-RING_6
SSNA1
Relaxase_C
COG2_N
Trimer_CC
CC_BshC
DUF7575
Sina_RING
Motif
Other DBs
NCBI-GeneID:
123806413
NCBI-ProteinID:
XP_045675497
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MEVLLGNGRRKGAETRWWSRRQLQSSGLLSCYSILGGRGQASQPALWMAAWWVSMTELED
RLQCPICLEVFKEPLMLQCGHSYCKDCLVSLSCHLDSELRCPVCRQEVDGSSSPPNVSLA
RVIEALRLPRDPEPNVCAHHRNPLSLFCEKDQELICGLCGLLGSHQHHRITPVSTVYSRM
KEELAALISDLKQEQKKVDEHIAKLVNNRTRIVNESDVFSWVIRREFQELHHLVEEEKAR
CLEGVEGHTRGLVASLDMQLEQAQGTRERLVQAKCVLEQFGDENHHEFIRKYHSMASRAE
LQQSRPLESMFSPISFKPGLHQADIKLTVWKRLFRKVLPAPESLKLDPATAHPLLELSKG
NTVVQCGLLPQRRASQPERFDYSTCVLASRGFSCGRHYWEVVVGSKSDWRLGVIKGTASR
KGKLTKSPEHGMWLIGLKEGRVYEAFGCPRVTLPVAGHPHRIGIYLHYEQGELTFFDADR
LDDLRPLYTFQADFQGKLYPMLDTCWHERGSNSLPMVLPPPSGPSHLTPPQPIKL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgttgctgggaaatgggaggaggaaaggggcagagactaggtggtggagcagg
cgtcagctgcaatcctcaggtctcctctcctgctattccatcctggggggaagaggccaa
gccagtcagcctgcactgtggatggcggcctggtgggtgagcatgacggagctggaggac
cgccttcagtgccccatctgccttgaggtcttcaaggagcccctaatgctgcagtgcggc
cactcctactgcaaagattgtctggtgtccctgtcttgccacctggactctgagctgcgt
tgcccagtgtgccggcaggaagtggatggcagcagctccccgcccaacgtctccctggct
cgggttattgaagctctgcggcttccccgggacccggagcctaacgtttgcgcgcaccac
cggaacccgctcagcctcttctgcgaaaaggaccaagagctcatctgtggcctctgtggc
ctgctgggctcccaccagcaccaccggatcacgccagtctccaccgtctacagccgcatg
aaggaggagctcgcagccctcatctcggacctgaagcaggaacagaagaaggtggatgag
catatcgccaagctggtgaacaacaggacccggattgtcaacgagtccgatgtattcagc
tgggtgatccgccgtgagttccaggagctgcaccacctggtggaggaggagaaggctcgc
tgcctggaaggggtggaaggtcacacccgcggcctcgtggcttccctggacatgcagctg
gagcaggcccagggcacacgggagcggctggtgcaagccaagtgtgtgctggagcagttt
ggggatgagaatcaccacgagttcatccggaagtaccactccatggcctccagagcagaa
ctccagcagtcccgacctttggagagcatgttcagccccatctccttcaagccaggcctc
caccaggcagatatcaagctgactgtgtggaaaaggctcttccgcaaggttctgccagcc
ccagaatctctcaagctggaccctgccacagcccatcctctcctggagctctccaagggc
aacacggtggtgcagtgtgggctcctgccccagcgacgtgccagccagcctgagcgcttc
gactatagtacttgtgtcctggccagccggggcttctcctgtggccgccactactgggag
gtggtggtgggcagcaagagcgactggcgcctgggggtcatcaaaggcacagccagtcgc
aaaggcaagctgaccaagtctccagagcacggcatgtggcttattggcttgaaggagggc
cgggtgtatgaggcctttggctgcccaagggtgaccctgcctgtggccggacacccccac
cgcattggcatctatttgcattatgaacagggagagctcaccttcttcgatgctgaccgc
ctggatgacctgcggccactctacacgttccaggctgacttccagggcaagctctaccca
atgctggacacatgctggcatgagaggggcagcaactcactgcccatggtgctgccccca
cccagtgggcccagccacctcaccccgccacagcccatcaagctgtag
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