Phyllostomus hastatus (greater spear-nosed bat): 123807496
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Entry
123807496 CDS
T07912
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
phas
Phyllostomus hastatus (greater spear-nosed bat)
Pathway
phas03013
Nucleocytoplasmic transport
phas03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phas00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123807496 (UPF3A)
03015 mRNA surveillance pathway
123807496 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phas03019
]
123807496 (UPF3A)
Messenger RNA biogenesis [BR:
phas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
123807496 (UPF3A)
mRNA cycle factors
P-body specific factors
123807496 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
123807496
NCBI-ProteinID:
XP_045677354
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MRSEKEGAGGPGVSVAVRGQSGRERTSAVEVQFRRESPRRDAGAPPALSSSCGGSAGKPR
EEKRTVLSKVVIRRLPPSLTKEQLEEHLHPLPAHDYFEFFTADLSLYPHLYSRAYINFRN
PDDILLFRDRFDGYIFIDNKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIDNDPEYKKF
LETYFVEEEKTSANPETLLGDIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERR
RRELEKKRIREEEKRKRREEEKCKRKETEKQKKTAEKEVRIKLLKKPEKGEEAATEKPKE
PGEEVDAGDGHWDACPGCAVGKAKPWDSLLEERREKSQNDSEKEQKETERKFREKELETQ
KYHLDDSRKLRAHYEFDKFSRRNEEEMKLGKGFTSDRGKAGSQDRGVPVEAAERPGREQK
SEDGLAPRKASVRNKDRPSLPLYQPGARMRARECGGRFSEEGRAGRRAEAEDSAGAGSKK
SKEAE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcggagaaggagggggccggaggccccggggtgtccgttgctgtgcggggccag
agcgggagggagaggacgtcggctgtggaagttcaattccgccgggaatctccacggaga
gatgcaggggcaccgccagccttgtcttccagttgtgggggcagcgcaggcaaacctcgc
gaggagaagaggacagttctgagcaaggtggttatccggcgccttcctcccagcctcacc
aaggagcagctggaagagcatctgcacccgctacctgcacatgattactttgagttcttt
accgcggatctcagtctttatcctcatctctactcaagagcatacattaattttagaaat
cctgatgacattcttctgtttagagatcgttttgatggatatatcttcattgacaataaa
ggcctagaatatcctgcagtggttgagtttgctccattccagaagatagccaaaaagaag
ctgaagaaaaaagatgccaaaactggaagcattgacaatgatccagaatataagaagttt
ttagaaacttactttgtggaggaagaaaaaactagtgccaatcctgaaactcttctgggg
gacatagaggcaaagacaagagaacttattgccagaagaaccacacctcttttggaatac
attaaaaataggaaattagaaaagcagagaattcgagaagagaagcgggaagagcgaagg
cgaagggagttggagaagaaacgcatacgggaagaagagaaaagaaagagaagagaagaa
gaaaaatgtaagagaaaagaaacagaaaaacaaaagaaaactgctgagaaagaagtaagg
attaagcttcttaagaaaccagaaaagggagaggaagcagccactgagaaaccaaaagaa
ccaggagaggaagttgatgctggagatggacactgggacgcctgtcctggctgtgctgtc
gggaaggccaagccctgggacagcctgctggaggagcgcagggaaaagtcacaaaatgac
agtgagaaagagcaaaaagaaacagagagaaaatttcgagaaaaagaacttgaaacacaa
aaataccacttggatgacagcagaaagcttagagctcactatgagtttgacaagttttca
agaagaaatgaagaagagatgaaattggggaaaggattcacctcagacagagggaaggca
gggagccaggaccggggcgtccctgtggaagcagcagagagaccagggagggaacagaag
agtgaggatggcctggcacccagaaaggcgagcgtgcgaaacaaggaccggccatccttg
ccgctgtaccagccaggagcacgcatgagagcacgcgaatgtggtggaagattctctgag
gagggccgtgccgggaggagagctgaggcagaagattcggcaggggctggttccaagaag
agcaaagaggcggaatga
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