Phyllostomus hastatus (greater spear-nosed bat): 123807976
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Entry
123807976 CDS
T07912
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
phas
Phyllostomus hastatus (greater spear-nosed bat)
Pathway
phas05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
phas00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
123807976 (DICER1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phas03036
]
123807976 (DICER1)
Chromosome and associated proteins [BR:
phas03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
123807976 (DICER1)
microRNA pathway
RISC loading complex
123807976 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
ResIII
DEAD
Cas3-like_C_2
DSRM_2
Motif
Other DBs
NCBI-GeneID:
123807976
NCBI-ProteinID:
XP_045678067
LinkDB
All DBs
Position
Unknown
AA seq
1922 aa
AA seq
DB search
MKSPALQPLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDRNT
IVCLNTGSGKTFIAVLLTKELSYQIRGDLARHGKRTVFLVNSANQVAQQVSAVRTHSDLK
VGEYSDLEVNASWTKEKWNQEFTKHQVLIMTCYVALIVLKNGYLSLSDINLLVFDECHLA
ILDHPYREIMKLCESCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATDL
VVLDRYTSQPYEIVVDCGPFMDRSGLYERLLMELEEALNFINDCNVSVHAKERDSTSISK
QILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCE
EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDE
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDSGEAD
VEPVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPD
GTFYSTLYLPINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMPVGKETV
KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTP
LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSL
QMLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDI
EKSEARIGIPSTKYSKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF
PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR
KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGV
GVRSLPVDFRYPNLDFGWKKSIDSKSFISMANSSPAENDNHCKHSTTVPENAAHQGANRA
SPAEDHDQMSVSRSAFLGEPSARLPVEVSTDPTAINGLSYHGNLANGSYDLANRDFCQGN
QLKCYKQEIPVQPTTSYPIQHLYTYENQPKPSDECTLLSNTYLDGSANSSTSDGSPLGAA
VPGTPEAVTVLRGGTGSERSPPPGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGD
SFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNW
LPPGYVVNQDKSNTDKWEKDEMTKDCLLANGKLDEAFEEDEEEEEDLAWRAPREDADDED
DLLEYDQEHIKFIDNMLMGSGAFVRKIPLSPLSAADSAYEWKMPKKSSLGGMPFSSDFED
FDYSSWDAMCYLDPSKAVEEDDFVVGFWSPSEENCGADTGKQSISYDLHTEQCIADKSIA
DCVEALLGCYLTSCGERAAQLFLCSLGLKVLPAIKRADREKAAGPARESLGGQQKSLSGS
RAAAPAAGPRSSAPRDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYRFKNK
AYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALV
NNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEE
DIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEM
EPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVP
NS
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccctgctttgcagcccctcagcatggcaggcctgcagctcatgacccctgct
tcctcaccaatgggtcctttctttggactgccatggcagcaagaagcaattcatgataac
atttatacgccgagaaaatatcaggtcgaactgctcgaagcagctctggaccgcaacacc
atcgtctgtttgaacactggctcagggaagacgttcatcgccgtgctgctcactaaggag
ctgtcctatcagatccggggggacctcgccagacatgggaagaggacggtgttcctggtc
aactccgcaaaccaggtcgctcagcaagtgtccgccgtcagaactcattctgatctcaag
gttggggaatactcagacctagaagtcaatgcatcttggacaaaagagaaatggaaccaa
gagtttactaagcaccaggttctcattatgacttgctatgtcgccttgattgttttgaaa
aatggctacttatcactgtcagacattaaccttttggtgtttgatgagtgtcatcttgca
attctagaccacccctaccgagaaattatgaagctctgtgaaagttgcccatcatgccct
cgtattttgggactaactgcttccattttaaatgggaaatgtgatccagaggaattagaa
gaaaagattcagaaactggagaaaattcttaagagtaatgccgaaactgcaactgacctg
gtggtcttagacaggtatacttcgcagccgtatgagattgtggtagactgtggaccattt
atggacaggagtgggctttacgaaagactgctgatggaattagaagaagcacttaatttt
atcaacgactgtaacgtatctgtacatgcaaaagaaagagattctacttcaatttctaaa
cagatactgtcagactgccgcgcggtgctggtggtcctggggccctggtgcgcagacaaa
gtggccggcatgatggtgagggagctgcagaagtacatcaagcacgagcaggaggagctg
cacaggaagtttctattgtttacagacactttcctacggaaaatacatgcactatgtgaa
gagcacttctcacctgcctcacttgacctgaaatttgtaactcctaaagtgataaaactg
cttgaaatcctacgcaaatacaaaccatatgagcggcagcagtttgaaagcgttgagtgg
tacaataataggaaccaggataattatgtgtcttggagtgattctgaggatgacgatgag
gatgaagaaattgaagaaaaggagaagccagagacaaattttccttctccgtttaccaat
attttatgtggaattatttttgtggaaagaagatacacagcggtcgtcttaaacagattg
ataaaggaagctggcaaacaagatccagagctggcttacatcagcagcaatttcataact
ggacatggcatcggaaagaatcagcctcgtaacaaacagatggaagcagaattcagaaaa
caggaagaggtactcagaaaatttcgggctcatgagaccaacctgcttattgcgacaagt
atcgtggaagagggcgtcgatataccgaagtgcaacttggtggtccgtttcgatttgccc
acggagtatcgctcctacgttcaatccaagggacgagccagggccccgatctccaattac
ataatgttagcggacacggacaagataaaaagttttgaagaagatctgaaaacatacaaa
gctattgaaaagatcctgagaaacaaatgctccaagtcggttgattccggtgaggccgac
gtggagcccgtggtggacgacgacgacgtcttcccgccgtacgtgctgaggcccgacgac
ggcggtccgcgagtcaccatcaacacggccatcgggcacatcaacagatactgcgcgaga
ctgcccagtgacccgttcactcacctggctcccaagtgcaggacccgggagctgccggat
ggtaccttctactcgacgctgtatctgccaatcaactcacctctccgagcctccattgtt
ggtccaccgatgagttgtatacgattggctgagagagttgtggctcttatttgctgtgaa
aaactgcacaaaattggcgaactggatgaccatttgatgcctgttgggaaagaaactgtt
aagtacgaggaagagctcgatttgcatgacgaagaagagaccagtgtcccaggcagaccc
gggtccacaaagcgaagacagtgctacccaaaggcaatcccggaatgtctgagggacagc
taccccaagccggatcagccctgctacctgtatgtgatcgggatggttctcacgacaccg
ttacctgatgagctcaacttcaggaggcggaagctctatccccctgaggacaccacaaga
tgctttggaatactgacagccaaacccatacctcaaatcccgcactttcctgtgtacacg
cgctctggggaggtgaccatatccattgagctgaagaagtccggtttcacactgtctctt
caaatgctcgaactgatcacaaggctccaccagtacatattctcgcatatccttcgcctc
gagaagcctgcactagaatttaaacccacagacgccgactcagcatactgtgttctacct
ctgaatgtcgttaacgactccagcactttggacattgacttcaaattcatggaagatatt
gagaaatccgaagctcgcataggcattcccagtacaaagtattcaaaagaaacacccttt
gtttttaaattggaagattaccaggatgcagttatcattccaaggtatcgaaattttgat
cagcctcatcgattttatgtagctgatgtgtacactgatcttaccccactgagtaaattt
ccttcccccgagtatgaaacgttcgcagagtattacaaaacaaagtataaccttgacctg
accaatctcaaccagccgctgctggatgtggaccacacatcttcaagactcaaccttctg
acgcctcgccacttgaaccagaaagggaaagctctcccgctaagcagtgccgagaagagg
aaggccaagtgggagagcctgcagaacaagcagatcctggttccggaactctgtgctatc
caccccattccagcatcactgtggagaaaagcggtctgcctccccagcatactctatcgc
cttcactgccttctgaccgcggaggagctgcgcgcccagacggccagcgacgctggcgtg
ggcgtccggtcacttcctgtggattttcgataccctaacctagacttcgggtggaaaaaa
tctatcgacagcaaatccttcatctcgatggctaactcctctccagctgaaaatgataat
cactgcaagcacagcacaaccgtccctgaaaatgctgcgcatcaaggtgctaatagagcc
tcccctgcagaagatcatgaccaaatgtctgtgagccgcagcgcgttcctcggtgagccg
tccgctagactcccggttgaagtttcaacagacccgacagcaattaatggtctttcttac
catggaaaccttgccaatggcagttacgacttagctaacagagacttttgccaaggaaat
cagctgaaatgctacaagcaggaaatacctgtacaaccaactacctcataccccattcag
catttgtacacttacgagaaccagcccaagcccagcgatgaatgtactctactgagtaac
acataccttgatggcagtgctaactcatctacctcagacggcagtcccctgggggccgcg
gtgcctggtactccggaagctgttacggtcctcagaggcgggacgggctctgagcggagt
cctcctcccgggtactcctcgaggactctcggcccaaatcctggactcatccttcaggct
ttgaccctttcaaatgctagtgatggatttaacctggagcggctggagatgctcggtgac
tcctttttaaagcacgccatcaccacgtacctgttttgcacttaccccgatgctcacgag
ggccgcctttcctatatgagaagcaaaaaggtcagcaactgtaatctctatcggctcgga
aaaaagaagggactgcccagccgcatggtggtgtcgatctttgatccccctgtgaactgg
cttcctcccggttatgtagtgaatcaagacaaaagtaacacagataaatgggagaaagat
gaaatgacaaaggactgcctgctggcgaacggcaagctggacgaggccttcgaggaggac
gaggaggaggaggaggacctggcgtggcgggctcccagggaggacgcggacgacgaggac
gacctcctggagtacgaccaggagcacatcaagttcatcgacaacatgctgatggggtcc
ggagcgttcgtgaggaaaatccccctctccccgctttcagctgctgactctgcctacgaa
tggaaaatgcccaagaagtcctccctgggcggcatgcccttctcctccgacttcgaggac
tttgactatagctcgtgggacgccatgtgctacctggaccccagcaaagccgtggaggag
gacgacttcgtggtgggcttctggagcccgtcggaggagaactgcggcgccgacacgggc
aagcagtccatctcctacgacctgcacacggagcagtgcatcgcggacaagagcatcgcc
gactgcgtggaggccctgctgggctgctacctgaccagctgcggcgagcgggccgcgcag
ctgttcctctgctcgctggggctgaaggtgctcccggcgatcaagagggctgaccgggaa
aaggccgcgggccccgctcgggagagcctcggcggccaacagaagagcctttcaggaagc
cgggctgccgcccccgcggccggcccgcgctcctccgcgcccagagacttggagtacggt
tgtttgaagatcccaccgaggtgtatgtttgatcatccagacgcggataaaacactgaac
cacctgatttcaggttttgaaaattttgaaaagaaaatcaactacagattcaagaacaag
gcttaccttctacaggctttcacgcatgcctcctaccactacaatacgattactgattgc
taccagcgcctagaattcctgggagatgcgattttggactacctcataaccaagcacctt
tacgaagacccgcggcagcactccccaggggtcctgaccgacctgcgctccgccctggtc
aacaacaccatcttcgcgtcgctggccgtgaagtacgactaccacaagtacttcaaggcc
gtgtccccggagctcttccacgtgatcgacgacttcgtgcagttccagctcgagaagaac
gagatgcagggcatggactccgagctcaggagatctgaggaggacgaggagaaggaagag
gacattgaagtcccaaaggccatgggggacatttttgagtcactggccggcgccatctac
atggacagcgggatgtcgctggagacggtgtggcaggtgtactaccccatgatgcggccg
ctgatagaaaaattttctgcaaatgtgccccgctcccctgtgcgagaattgcttgaaatg
gaaccagaaaccgccaaatttagcccggctgagagaacttacgacggcaaggtcagagtc
accgtggaagtggtaggcaaggggaagttcaaaggtgtcggccgcagctacaggatcgcc
aaatccgcagcagcacgcagagccctacgaagcctcaaagctaatcaacctcaggttccc
aacagctga
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integrated database retrieval system
