Phyllostomus hastatus (greater spear-nosed bat): 123808202
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Entry
123808202 CDS
T07912
Symbol
SPG11
Name
(RefSeq) spatacsin isoform X1
KO
K19026
spatacsin
Organism
phas
Phyllostomus hastatus (greater spear-nosed bat)
Pathway
phas05014
Amyotrophic lateral sclerosis
phas05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
phas00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
123808202 (SPG11)
05022 Pathways of neurodegeneration - multiple diseases
123808202 (SPG11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phas03400
]
123808202 (SPG11)
DNA repair and recombination proteins [BR:
phas03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
123808202 (SPG11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
123808202
NCBI-ProteinID:
XP_045678638
LinkDB
All DBs
Position
Unknown
AA seq
2445 aa
AA seq
DB search
MAAEKWPGSAAAGGSCNAEERERVLPMLLLPVPAEATGRLGTWAQLHREQEVLGSLTAAG
SLQVLSLAPGGRGGGGCSLDGPFRQFVWEDSHNSSTPTERPRLLALSENYELLIYEFNLK
DGRCDGTILYSCSEEILQKLIKDQNISISLLSLRILSFHNNTSLLFINKFIILHIMFPEK
DAEIRVLNYFTLPLPAQAVDSIIDTQLCRGILFVLSSLGWIYIFDIVDGVHVAHVDLALH
QEDMCNEQQQEPAKISSFTSLKVSQDLEVAVIISSSNSAIALNLNLYFRQHPGHLLCEKI
LEDDPIEGPKGIDEDDPVNSDYNMKLTKFSFQVDRSWKAQLLSLNETINSSKLEVSHYAP
WFQDILHLEPPESNNHCPSVPVWAFIPQDMMRSQYNFSQKDHAKTSDPERAWKRMCISEQ
EEPIELRCVSVTGFTALFTWAVEKTGWTIILWDLETEGMQCFCLGKKCIPIDNSGDPQLC
LALTENGLSLILFGLTQEEFLNRLMIHGNASTVDSLCHLNGWGRCSIPIHALEAGIENRQ
LDTVNFFLKSKENLLNPSSKSPLPDQFDQFPSHLYLRNVQELTPALDLLCSAIRESDSET
QSKNFSEQLLNLTLSFLNKQIRELFIQNEELDEYLQKGVNILTSYINELRTFMIKFPWKL
TDAVDEYDVNENVLKVKESNIWEKLSIEEVIANAILNNKIPEAQTFFRINSHSAQRLEEL
IRIGLDLVFDNLKKNNVKEASELLKNMGFDVKDQLLKICFYTTDKNIRDFLVEILKEKKY
FSEKEKSTIDFVHQVEKFYSEYLQENMQIQSFPRYWMKEQDFFKHKSALDSFLKYDYIDK
FDKQNHTIALNWAQWWNQLTQESILLPRINPEEYKSYSSEALWRYFTARHDWLSIISWIG
EFQTQNNCSSLQQNKWPPLTVDVIDQNTCCNNNMRNKIIDELARNGIFLISELEDFELFL
LRLNRIGGVMQDALPVQNYRSKEGWDFHSHFILYCLEHSLQYLLYVYLDCYKLSPPNCPF
LDKKELHEDHPWFEFLVQCRQVSSNLTDPKLIFQASLANAQILIPSNQASVSSMLLEGHT
LLALATTMYAPGGVSLVVQNEENENCLKKVDPQLLKMALTPYPKLKTALFPQYAAPSVLP
PDITLYHLMQSLLPFDPSRLFGWQSANTLAIGDASSHLPHFSSPDLVNKYAIVERLNFAY
YLYHGRPSFAFGTFLVQELTKSKTPKQLIQQVGNEAYVLGLSSFHVPSIGAACVCFLELL
GLDSLKLRVDMKVANIILNYRCTNEDAQYSFIRESLAEKLSKLAEDERAAVEELLVLLEE
GIWNNVQQEEIKRLSNESSSHWTLVVQFCRLHNVKLSTAYLRECARANDWLQFIIHSQLH
NYHPEEVKSLLQYFSPVFQDHLRLAFENLPPVSNSSMDSDQVCNKCPQELQRHKEEIIDF
FEILFRCSKEPNSWCWLLAEAVKQQAPILSVLASCLQDASSIPCLCVWIITSVEDSVAAE
AMGHIQGSVEGHTWDLEDLSVIWRTLLRRQKSKTLIRGFQLFFKDSPLLLMMEMYELCMF
FKNYKEAQAKLLEFQKTLETLETAAIKVHAAIPVPWLKEQVCFLLKLMLQQCRTQYELGK
LLQLFVAIEHLFSDGPDIKKLCVLSQILKDTSVTINHAIITSYSLENFQHECRFILEKLE
TNGQFASARRVAELAELPVDNLVIEEITQEMQTLKHIDQWSLKQARIDFWKKCHENFKKN
SISSKAASSFFSAQALVACEYPNEEGQSNTEECHLLLTLAGHWLAQEDLVPVEKLEELEK
QIWLCRITQHTLRGNQEEIEPRFSQQISTSGELPFDGLASEFSFSKLAALNTSKYLELNG
LPSKETCENRLDWKEQESLNFLIGRLLDDGCVHEASRVCRYFRFYNQDVALVLHCRALAS
GEASVDDLHTEIHALLQSAELLEEEKEPNIPLRKAPSTSSLDSQSFVMLPPSDEVVTNLE
ILTSRCLHGKNYCRRVLCLYELSKELGCSYTDVATQDGEAMLRTILASQRPDRCKRAQAF
ISTQGLEPDRVAELVAEEVTRELLSQSEGTGHKQMVTPAEESQAFLQLTALCQDRTLVGM
KLLEKISSVPHGELSCTTELLILAHHCFTLTCHMEGIIRVLQAARLLTDDHLAPNEEYGL
VVRLLTGIGRYNEMTYIFELLHKKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKH
NMIALCFSMCREIGENHEAAACIQLKLIESQPWEDNLKDGHQLKQLLLKALTLMLDAAES
YAKDSCVRQALHCHRLTRLLTLQIHFLNTGQNTMLINLGRHRLMDCIMSLSRFYQASIVA
EAYDFVPDWAEILYQQVILKGDFNYLEEFKQQRLLRTSIFEEISEKVKQRQPTEMAVKNL
KKLLTCCEDVYLYYKLAYEHKFYDVVNMLLKDPQTGCCLKDMLAG
NT seq
7338 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagagaagtggcccggaagtgctgccgctggcggcagctgcaatgctgaagag
cgggagcgggttctacctatgttgctgctgcccgtccccgctgaggcaaccgggcggctg
ggaacctgggcgcagttgcacagagagcaggaggttctggggagcctgaccgctgcaggc
agccttcaagtgctttctttggcgccaggcggccggggcgggggtggctgctccctagac
ggccccttccggcaatttgtgtgggaggattctcataacagcagcacaccaacagagagg
cccaggctgcttgctcttagtgaaaattatgaactgctcatctatgaatttaatttgaaa
gatggaagatgtgatggaaccattttgtatagctgtagtgaggagatactgcaaaagctt
attaaagatcaaaatatcagtatttccttattatctttgagaattctgtcatttcacaat
aatacatcattattgttcatcaacaaatttatcattctacacatcatgtttcctgaaaaa
gatgctgagattagagtactcaactatttcactttacccttgcctgcccaggcagtggac
agtattattgacacgcagctctgcagaggaattctttttgttttgagtagtttaggctgg
atctacatttttgacattgtggatggtgtacatgtagctcatgtggatttagcacttcat
caagaagatatgtgtaatgagcagcaacaggagccagccaagatttcttcctttacttca
ctgaaagtgtctcaagacctagaggttgcagtgattatcagctcctccaactctgcgatt
gctcttaacttaaatttgtatttcaggcaacacccaggacacctactttgtgaaaaaatt
ctggaagacgatcctattgaaggccctaaggggatagatgaagatgatcctgttaattct
gactacaacatgaaactgaccaagttttccttccaagttgataggtcttggaaagcccag
ctgttatcactgaatgaaaccataaatagctccaaactggaggtttcccattatgctcca
tggttccaggatattctgcatctggagccccctgaatctaataaccactgccccagtgtg
ccagtttgggccttcattccacaggacatgatgcgcagtcagtataatttttcacagaaa
gatcatgccaagaccagtgacccagagagagcatggaaaagaatgtgcatcagtgaacaa
gaggaacccatcgagcttagatgtgtgtctgtgacaggattcactgcactgtttacttgg
gcagtggagaagacaggctggaccattatcctttgggatttggagactgagggcatgcag
tgcttttgccttgggaagaagtgtattcctatagataacagtggagacccacaactgtgc
cttgctttgacagaaaatggactctctctgattttgtttggtttgactcaagaggagttt
ttaaatagactaatgatccatggaaatgccagcactgtggactctctttgccatctcaat
ggttggggaaggtgctcaatccccatacatgcactagaggccgggatagaaaatcgtcag
ctggacacagtaaatttctttttgaagagcaaggaaaatcttttgaatccatcctccaaa
tctcctttacctgatcagtttgatcagtttccatctcatttatatttaagaaatgtgcaa
gagctcacaccagcattggatttactttgctcagcaattagagaaagtgattctgaaacc
caaagcaaaaacttttcagaacaattgcttaatcttacactgtccttcctcaacaagcaa
ataagggagctttttattcaaaatgaagagttagatgaatatctacagaaaggggtgaac
attttgaccagctatattaatgaacttcgaaccttcatgataaagtttccttggaagcta
acagatgctgtagatgaatatgatgtaaatgaaaatgtcctcaaagtaaaggagagcaat
atatgggagaaactcagcattgaggaagttattgctaatgccattttaaacaacaaaata
ccagaggcacaaactttcttcaggattaatagtcattccgctcaaagactcgaagagctg
atcagaataggtctagatttggtctttgacaatttgaaaaagaacaatgtaaaggaagcc
tccgagcttttaaagaatatgggctttgatgtaaaagaccagttgctcaagatatgcttc
tatacaactgataaaaatatacgggactttttggttgaaattttaaaagaaaaaaaatat
ttttctgagaaagaaaaaagtactatagacttcgtgcatcaagttgagaagttttattca
gaatatttgcaagaaaatatgcagatccagtcctttcccaggtattggatgaaggaacaa
gattttttcaagcacaaatctgctttggactcattcctgaaatatgattatatagataag
tttgacaaacagaatcatacaattgcattaaattgggctcagtggtggaatcaactaaca
caagaatccatccttcttcccaggataaatccagaagaatacaaatcgtattcttctgaa
gccctctggagatacttcacagctcgccatgactggttaagcattatctcatggattgga
gaatttcagacccagaataattgttcttcacttcagcagaacaaatggcctcctctgact
gttgatgtcattgatcagaatacttgctgcaacaacaacatgaggaataaaattatagat
gagctggccaggaatgggatttttcttatatctgaactggaagactttgaactcttcctc
ctaagactgaaccgcattgggggtgtgatgcaagatgcccttcctgttcaaaactacaga
tccaaggaaggatgggatttccattctcacttcattctctattgtttggagcacagtctg
cagtatcttctttatgtctatcttgactgttataagcttagtcctccaaactgtcccttt
ttggacaaaaaagaattacatgaagatcacccttggtttgaatttttagttcagtgtcga
caagtttccagtaacttaacagatcctaagctgatcttccaggctagccttgcaaatgct
caaatactgattcccagcaaccaggccagtgtgagcagtatgctgctggaaggacacacg
ctcctggctcttgccaccacgatgtatgcacctggcggtgtcagcctggttgtccagaat
gaagaaaacgagaactgtttgaagaaagtggatccccagctactgaagatggcattaacg
ccttatcccaagctaaagactgctctcttcccacagtacgctgcccctagtgtcctgcca
cctgacattacactctaccacctgatgcagtcattattgccctttgatcctagcagactg
tttggctggcagtctgccaacacactagctataggagatgcatccagtcatctcccacac
ttctctagccctgacctggtgaataaatatgctatagtggaacgtctgaattttgcttat
tatttatatcatgggcggccatcatttgcatttggtacttttctggtccaagagctaact
aagagcaagacacccaaacagctgatccagcaagtaggcaatgaagcctatgttttaggc
ctctcttccttccacgtgccttcaataggagctgcctgtgtttgcttcttagaattgctt
ggcctcgacagcctcaagctcagagttgatatgaaagtggccaatataattctgaactac
cggtgtaccaacgaagatgctcagtatagctttatcagagagtctctagctgaaaaactt
tctaaactggctgaggatgaaagggcagccgtagaagagttgcttgttctcttagaagaa
ggtatatggaataatgttcaacaagaagaaataaaaaggttatccaacgaatctagcagc
cattggacattagtggtacagttctgcaggctccacaatgtgaaactaagcacagcttac
cttagagaatgtgccagagcaaatgattggttacagttcattattcacagccagctccat
aattaccaccctgaggaggtgaaatctcttctccagtactttagccctgtctttcaagac
cacttaaggctggcttttgagaacttgcccccagtgtccaactccagcatggacagtgac
caagtctgcaacaagtgcccccaggaactccagagacacaaagaagagataattgatttc
tttgaaattttgttccggtgctcaaaggagccaaactcctggtgctggcttctggctgaa
gcagtgaaacaacaggccccaattcttagtgtcctagcctcatgtctccaggatgccagt
agtattccttgtctctgtgtttggatcatcacttctgtggaggacagtgttgcagctgaa
gcaatgggacacattcaaggctccgtggagggtcatacctgggatctcgaggacctctca
gtcatctggaggacattattaagaaggcagaagagcaaaactctcatcagaggtttccag
cttttctttaaggattccccattactattgatgatggaaatgtatgaactctgtatgttc
ttcaagaattataaggaagcccaagctaaactactggagttccagaagacccttgaaact
cttgaaacagcagccataaaggtccacgctgccatccccgttccatggctgaaggagcag
gtgtgttttcttctgaagcttatgctgcagcagtgtaggacccagtatgagctggggaag
cttttacagctgtttgttgcaatagagcatctcttctctgatggtccagatataaagaag
ctgtgtgtcctaagccaaattttgaaggatacatccgtaactattaatcatgcaattatt
accagttatagccttgagaattttcagcatgaatgtagatttattttggaaaaactggag
acaaatggacagtttgcttcggctagaagggtagcagaattagctgagttacctgtggac
aacttggttattgaagagataacacaagaaatgcagaccttaaaacacattgaccagtgg
tccctgaaacaagcaagaattgacttctggaaaaaatgccatgagaattttaagaaaaat
tccatttcaagcaaagcagcctcttcctttttctcagcccaggcccttgtggcatgtgag
tacccaaatgaggagggacagagcaatactgaagaatgccatctgctgctcaccctggca
ggacactggcttgctcaggaggacctagtgcctgtggagaagctggaggagctggagaag
cagatctggctctgccgtatcacccagcacaccctcagaggaaaccaggaggaaatagag
cccagattttctcaacagatctcaactagtggtgaacttccttttgatggcttagccagt
gagttttcattctctaagctggctgctctgaacacatcaaaatacttagagcttaatggt
cttccatctaaagagacttgtgagaacagactagattggaaagagcaggagtcactaaac
tttttgattgggcgcctattggatgatggctgtgtgcatgaagcaagtagagtatgccgg
tattttcgtttctataaccaagatgttgccttggtattgcactgcagagcgctggcttca
ggagaagctagtgtggatgacctacatacagagatccatgctctcctacaaagtgctgaa
ctgctggaggaagaaaaagaacctaacattcctctaaggaaagccccaagcacttcaagt
ttggatagtcagtcatttgtgatgctgccccccagtgatgaagtggtaactaatctcgaa
attctgacaagcagatgcctccatggaaaaaactactgccggcgggtcctctgcctgtat
gaactttccaaggaattgggctgttcctacacagatgtcgccacccaagatggggaggcc
atgctccgcacaatcttggcctctcaacggcctgatcgatgcaagagagcccaagccttc
atcagcacccagggccttgagccagatcgggtggctgagctcgtggctgaagaggtgacc
cgggagctgctgtcccagtcagagggaacaggacataagcagatggtcactccagcagag
gaaagccaggcatttcttcagctgaccgctttgtgtcaggaccgcaccttggtaggcatg
aagttgttggaaaagatttcctccgttccccatggggaactgtcttgcaccacagagctg
ctgattctggcccatcattgcttcacgctgacatgccacatggagggcatcatccgagtg
ctgcaggctgcccggctgctcacagatgaccatttggcccccaatgaggagtatgggctg
gtggtacgtctcctcactggcattggaagatacaatgagatgacatacatatttgaattg
ctgcataaaaaacactacttcgaagtgctgatgcggaagaagctggatccgagtggtacc
ctgaagacagccctactggactacatcaaacgctgccgccctggggacagtgagaagcac
aacatgattgccctgtgcttcagcatgtgcagggagatcggggagaaccatgaggcagct
gcctgcatccaactgaaactgattgagtctcagccttgggaagacaacctcaaggatggg
caccagctgaagcagctgctgctgaaggccctgactctgatgctggatgcagcagagagc
tatgccaaggactcctgtgtgagacaggccctgcactgtcaccggctcaccaggttgcta
acactgcagattcattttctgaacactggccagaacaccatgcttatcaacctgggccgc
cataggctgatggactgcatcatgtccctatctcggttctaccaggcttctattgtggct
gaggcctatgactttgttcccgattgggctgaaattctataccaacaagtgattcttaaa
ggagactttaattacttggaagaatttaagcagcaaaggttactaagaaccagtatattt
gaagagatttctgaaaaagttaaacaacgccagcctactgagatggctgtgaaaaacctg
aagaagttactcacatgttgtgaagatgtctacctgtattacaagctggcatatgaacat
aaattttatgatgttgtaaatatgcttctgaaggaccctcagacaggttgctgtctaaag
gacatgctagcaggttag
DBGET
integrated database retrieval system
