Phyllostomus hastatus (greater spear-nosed bat): 123808290
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Entry
123808290 CDS
T07912
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
phas
Phyllostomus hastatus (greater spear-nosed bat)
Pathway
phas04140
Autophagy - animal
phas04142
Lysosome biogenesis
phas04148
Efferocytosis
phas05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
phas00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
123808290 (VPS39)
04140 Autophagy - animal
123808290 (VPS39)
04148 Efferocytosis
123808290 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
123808290 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phas04131
]
123808290 (VPS39)
Membrane trafficking [BR:
phas04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
123808290 (VPS39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
LIF1_N
VPS18_solenoid_2nd
DUF4145
KCTD11_21_C
EcoR124_C
Motif
Other DBs
NCBI-GeneID:
123808290
NCBI-ProteinID:
XP_045678821
LinkDB
All DBs
Position
Unknown
AA seq
886 aa
AA seq
DB search
MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVVPADVAAPESGSCN
RFEVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLF
TCDLQHSETGEEVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVG
FKRDYYLIRVDGKGAIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCA
LNWTDIPVAMEHQPPYIIAVLPRYVEIRTLEPRLLVQSIELQRPRFITSGGSNIIYVASN
HFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQK
RFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPSLSAAELEKAHLALIDYL
TQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLL
RLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTV
QYLQHLGTENLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLVENFKGLA
IPYLEHVIHVWEETGSRFHNCLIQLYCEKVQGLMKAYLLSFPTGKAPVPAGEEEGELGEY
RRKLLMFLEISSYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTKMAE
EYCHKHYDQNKDGNKDVYLSLLRMYLSPPSVHCLGPIKLELLEPQANLQAALQVLELHHS
KLDTTKALNLLPANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQ
QVKCIITEEKVCMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgccttcgaaccggtgccgatcctagaaaagctgcctctgcagatcgactgt
ttggctgcctgggaggaatggcttcttgttggaaccaaacaaggacaccttcttctctat
aggattcggaaggacgttgtgccagcagacgtggcagcacctgaaagtggcagctgcaac
aggtttgaagtgacactagagaaatccaataagaacttctccaaaaagattcagcagatc
catgtggtttcccagtttaagattctagtcagcttgttagaaaataatatttatgtccat
gacctactgacatttcaacaaatcactacggtttcaaaggcgaagggagcgtctctgttc
acgtgtgacctccagcactcagagactggcgaggaggtgttacggatgtgtgtagctgtg
aaaaagaagctgcagctctatttctggaaggacagggagtttcatgaattgcagggggac
tttagtgtaccagatgtgcccaagtccatggcatggtgtgaaaattctatctgtgtgggt
ttcaagagagactactacctgataagggtggatggaaagggggctatcaaagagctcttt
ccaacaggaaaacagttggagcccttggttgcacccctggcagacggaaaagtggccgtg
ggccaggacgatctcaccgtggtgctcaacgaggaggggatctgcacgcagaagtgtgcc
ctgaactggacggatataccagtggccatggagcaccagcctccctacatcattgcagtg
ttgccgcgatacgtggaaatccgaacactcgagccgaggcttctggtccagagcattgaa
ttgcaaaggccccgtttcatcacctcaggaggatcaaacattatctatgtggccagcaat
cactttgtttggagacttattcctgtccccatggcaacccaaatccaacagctgctccag
gacaaacagtttgaattggctctgcagcttgccgaaatgaaagatgattccgacagcgaa
aagcaacaacagatccatcatatcaagaacttgtatgccttcaatctcttctgccagaag
cgttttgatgagtccatgcaggtcttcgctaagcttggcacagatcctacccacgtgatg
ggcctgtacccagacctgctgcccacagactataggaagcagctgcagtatccaaacccc
ctgccctcgctctccgcggctgaattggagaaggctcacttagctctgattgactacctg
acacagaaacgaagccagttggtgaagaagctgaatgactctgaccaccagtccagcacg
tccccgctcatggagggcactcccaccatcaagtccaagaagaaactgttgcaaatcatc
gacaccaccctgctcaagtgctacctccacacaaatgtggccctggtcgccccgctgctg
cgcctggagaacaatcactgccacatcgaagagagtgagcacgtgctgaagaaggctcac
aagtacagtgagctgataatcctgtacgagaagaaggggctccatgagaaagctctgcag
gtgctggtggaccagtccaagaaagccaactcccctctgaaaggccatgagaggacggtg
cagtatctgcagcatctgggcacagaaaacctgcatttgatcttctcctactcggtgtgg
gtgctgagagacttcccagaggatggcctgaagatatttaccgaagacctcccagaggtg
gagtctctgccccgagaccgagtgcttggcttcttagtggagaattttaagggtctggct
attccttatctggaacatgtcatccacgtttgggaggagacgggctcccggttccacaac
tgcctgatccagctgtactgcgagaaggtgcaagggctgatgaaggcatacctcctgtcc
tttcccacaggcaaagctccagttcctgccggagaggaggagggtgaactgggagagtat
cgacggaagctccttatgttcttggaaatttccagctactatgacccaggccgactcatc
tgcgattttccttttgatggcctcttagaagagcgcgctctcctgctgggacgcatgggg
aaacacgagcaggctctcttcatctatgtccacatcctgaaggacacgaagatggccgag
gagtactgccacaagcattatgaccagaacaaagacggcaacaaagatgtgtatttgtcc
ctgctccggatgtacctgtcgccccccagcgttcactgcctggggccaatcaagctggaa
ctgctggagcctcaagccaacctccaggcagccctgcaggtccttgagctgcaccacagc
aaactggacaccacgaaggccctcaaccttctgccagcaaacactcagattaatgacata
cgcatcttcctggaaaaagtcttagaggaaaatgcgcagaagaaacggttcaaccaggtg
ctcaagaaccttctccatgctgagttcctgcgggtccaggaagagcggattttacaccag
caggtgaaatgcatcatcacggaggagaaggtgtgcatggtgtgtaagaagaagattggg
aacagtgcatttgcgagataccccaatggagtggtggtgcactacttctgttccaaagag
gtgaacccggcagacacctga
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