Phyllostomus hastatus (greater spear-nosed bat): 123810124
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Entry
123810124 CDS
T07912
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
phas
Phyllostomus hastatus (greater spear-nosed bat)
Pathway
phas03440
Homologous recombination
phas03450
Non-homologous end-joining
phas04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
phas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123810124 (RAD50)
03450 Non-homologous end-joining
123810124 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
123810124 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phas03032
]
123810124 (RAD50)
03400 DNA repair and recombination proteins [BR:
phas03400
]
123810124 (RAD50)
DNA replication proteins [BR:
phas03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
123810124 (RAD50)
DNA repair and recombination proteins [BR:
phas03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
123810124 (RAD50)
BRCA1-C complex
123810124 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
123810124 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
DUF1664
DUF7491
AAA_29
DUF2703
Motif
Other DBs
NCBI-GeneID:
123810124
NCBI-ProteinID:
XP_045681549
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELVAVQRSMVCTQKGRKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVRECQTELKYLKQNKEEACEIRDQITNKEAQLTSSKEI
VRSYENELDPLKNRLKEIEQNLSKIMKLDNEIKALESRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QENIRARDSLIQSLATQLELDGFERGPFSERQIKNFHKLVRERQEKEEETARQLMNDFAE
KETLKQKQIDEIRDKKIGLGRIIELKSEILSKKQNELKNVKCELQQLEGSSDRILELDQE
LTKAEHELSKAEKNSNVETLKTEVTSLQNEKADLDRIVRKLDQEMEQLNHHTTTRTQLEM
LTKDKADKDEQIRKIKSRHSDELNSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINNELKRKEEQLSNYEDKLFDVCGSQDFESDLDKLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQSIIDLKEKEMPELRNKLQNVNRDIQRLKNDIDEQETLLGTIMP
EEESAKMCLPDVTIMERFQMELKDVERKIAQQAAKLQGVDLDRTVQQVNQEKQEKQHKLD
TVSSKIELNRKFIQDQQEQIQRLRSITNELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LYREIKDAKEQISPLETTLDKFQQEKEEIICKKNSSIKITQDKINDIKEKVKNIHSYMKN
IENYIQDGKDDYKKQKETELNKVIAQLSESEKHHEKINKEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKRHLKEMGQMQVLQMRNEHQNLEEKIDTIKRNHSLAIGRQKG
YEDEIIHFKKELQKPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENLSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSKYVEKFYRIKKNLDQCSEIVKCSVNSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattctgggcgtgcggagttttggaatagaggacaaa
gataagcaaattatcactttcttcagtcccctcacaattttggttggacccaatggggcg
gggaagacgaccattattgaatgcctaaaatatatttgtactggagatttccctcctgga
accaaaggaaatacatttgttcatgatcccaaggttgctcaagaaacagatgttagagcc
cagatccgcctgcagttccgtgatgtcaacggcgagcttgtggccgtgcagcggtccatg
gtgtgcactcagaagggcagaaagaccgagtttaaaaccctggagggggtcattaccagg
acaaagcatggcgaaaaggtcagcctcagctctaagtgtgcagaaattgatcgagagatg
atcagttctcttggggtttccaagtctgtgctaaataatgttattttctgtcatcaagaa
gattctaattggcctttaagtgaaggaaaggctttgaagcaaaaatttgatgaaattttt
tcagcaacaaggtacattaaagccttggaaacacttcgacaggtacgccagacacaaggt
cagaaagtaagagaatgtcaaacagaactaaaatatctgaagcaaaataaggaagaagct
tgtgagattcgtgatcagattactaataaggaagcccagttaacatcttcaaaggaaatc
gtcagatcctatgagaatgaacttgatccgttgaagaatcgtctaaaagaaattgaacaa
aatctctctaaaataatgaaacttgacaatgaaattaaagccttggaaagccgaaagaag
caaatggagaaagataatagtgaactggaacagaaaatggaaaaggtttttcaagggact
gatgagcaactaaatgatttatatcacaatcaccagagaacagtaagggagaaagaaagg
agattggtagactgtcagcgtgaactggaaaaattaaataaagaatcaaggcttctcaat
caagaaaaatcagaactacttgttgaacagggtcgtctacagctacaagcggatcgccat
caagaaaacattcgtgctagagattcattaattcaatctttggcaacacaattggaattg
gatggctttgagcgtggaccattcagtgaaagacagattaaaaattttcacaaacttgtg
agagagagacaagaaaaggaagaagaaactgcccgccaactgatgaatgactttgcagaa
aaagaaactctgaaacaaaaacagatagatgagataagggataagaaaattggactggga
agaataattgagctaaaatcagaaatcctcagtaagaagcagaatgagctgaaaaatgtg
aagtgtgaattacagcaattggaaggatcttcagacaggattcttgaactggaccaggag
ctcacaaaagctgaacatgaacttagcaaggctgagaaaaacagcaatgtagaaactcta
aaaacagaagtaacaagtcttcaaaatgagaaagcagatctagacaggattgtgcgtaaa
ttggaccaagagatggagcagctgaaccatcatacaacaacacgtacccagttggagatg
ctgaccaaagacaaagctgacaaagatgaacaaatcagaaaaataaaatctaggcatagt
gatgaattaaattcattgttagggtattttcctaacaaaaagcagcttgaagactggctt
catagtaaatcaaaagaaattaatcagaccagggacaggcttgccaaattgaacaaggaa
ctagcttcagctgagcaaaataaaaatcatataaataatgagctaaaaaggaaggaagag
cagttgtccaattatgaagacaagctgtttgatgtttgtggtagccaggattttgaaagt
gatttagacaaacttaaagaagaaattgaaaaatcttcaaaacaacgagccatgctggct
ggagccacagcagtttactcccaattcattactcagctaacggatgaaaaccagtcctgc
tgccccgtctgtcagagagtttttcagacagaagctgaattacaagaagtcatcagtgat
ttacagtctaaactgcggctggctccagataaactcaagtcaacagaatcagagctaaag
aaaaaagaaaagcggcgagacgaaatgctggggcttgtgcccatgaggcaaagcataatt
gatttgaaagagaaggaaatgccagaattaagaaacaaactgcagaatgtcaatagagac
atacagcgtctaaagaatgacatagatgagcaggaaacactcttgggcacaataatgcct
gaagaagaaagtgctaaaatgtgtctgccagatgttacaattatggagagatttcagatg
gaacttaaagatgttgaaagaaaaattgcgcaacaagcagctaagctgcaaggagtagac
ttggacagaactgttcaacaagtaaaccaggaaaaacaagaaaaacaacacaaattagat
acagtttccagtaagattgaactgaatcgtaagtttatacaggaccagcaggaacagatt
caacgcctgagaagtataacaaatgaacttaaatcagagaaacttcagatatccactaac
ttacaacgtcgtcagcaactggaggaacagactgtggaattatccactgaagttcagtcc
ttatatagagagataaaggatgctaaagaacagataagccctttggaaaccacactggac
aagttccaacaggaaaaagaagaaataatttgcaaaaaaaattcaagtatcaaaataaca
caggataaaataaatgatatcaaagagaaagttaagaatattcacagttacatgaaaaac
attgagaattatatccaagatgggaaagatgactataagaagcaaaaagaaaccgaactt
aataaagtaatagctcaactaagtgaaagcgagaaacaccacgaaaagataaataaggaa
atgggaatcatgagacaagatattgatacacagaagatacaagaaagatggctgcaggat
aaccttacgttaagaaaaagaaatgaagaactaaaagaagttgaagaagaaagaaaacga
catttaaaggaaatgggtcaaatgcaggttttacagatgagaaatgaacatcagaacttg
gaagaaaaaatagatactataaaaagaaatcacagtttggcaatagggcgacagaaaggt
tatgaggacgaaattatccactttaagaaagaacttcaaaaacctcaatttcgagatgcc
gaggaaaagtatagagaaatgatgatagttatgagaacaacggagcttgtcaacaaggat
ctggatatttattacaagacccttgaccaagcgataatgaaatttcacagtatgaaaatg
gaagaaatcaataaaatcatccgtgacctttggcgaagtacctatcgtggacaagatatt
gaatatatagaaattaggtctgatgccgatgaaaacctgtcagcttctgataaacggcgg
aattacaactaccgcgtggtgatgctgaagggggacacggccttggatatgcgaggacgg
tgcagcgctgggcaaaaggtgttggcctctctcatcatccgcctggccctggcggaaacg
ttctgcttgaactgtggcatccttgccttggatgagccgacaacaaatcttgaccgagaa
aacatcgaatctcttgcacatgctctggttgagataataaaaagtcgctcgcagcaacgt
aacttccagcttctggtaatcactcacgatgaagattttgtggagctcttagggcgttct
aaatatgtggagaaattctacaggattaagaagaacctcgatcagtgctcagagattgtc
aaatgcagtgttaactccctgggatcttatgttcattaa
DBGET
integrated database retrieval system
