Phyllostomus hastatus (greater spear-nosed bat): 123810275
Help
Entry
123810275 CDS
T07912
Symbol
SKIV2L
Name
(RefSeq) helicase SKI2W isoform X1
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
phas
Phyllostomus hastatus (greater spear-nosed bat)
Pathway
phas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123810275 (SKIV2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phas03019
]
123810275 (SKIV2L)
Enzymes [BR:
phas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123810275 (SKIV2L)
Messenger RNA biogenesis [BR:
phas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123810275 (SKIV2L)
mRNA degradation factors
3'-5' decay
Ski complex
123810275 (SKIV2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
ResIII
Helicase_C
DUF3516
Motif
Other DBs
NCBI-GeneID:
123810275
NCBI-ProteinID:
XP_045681802
LinkDB
All DBs
Position
Unknown
AA seq
1290 aa
AA seq
DB search
MMERERLVLSPPDPLDLPLRAVELGCSGRWELLNIAGAPESTLPHNLLPCAPDLQQEAEQ
LFLSSPAWLPLHGLEHSARKWQRKMDPWSLLAVLGAPVPSDLQAQRHPTTGHILGYKEVL
LENTDLSATTSLSLRRPPGPISQSLWGNPTQYPFWPGGMDEPTITDLSTREEAEEEIDFE
TALLTVPPGFKKGVDFAPKDYPAPTPGLLSLSRLLEPLDLGGGDEDEREAMGQPGGTRGD
TVMASPCNAPLVRASSLEDLVLKEASTIASSLEPPKTLPQEQWAIPVDVTTPVGDFYRLI
PQPAFQWPFEPDVFQKQAILHLERHNSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTS
PIKALSNQKFRDFRNTFGDVGLLTGDVQLHSEASCLIMTTEILRSMLYSGSDVIRDLEWV
IFDEVHYINDAERGVVWEEVLIMLPEHVSVILLSATVPNALEFADWIGRLKRRQIYVIST
VTRPVPLEHYLFTGNSPKTQDELFLLLDSQGTFHTKGYYAAVEAKKERMSKHAQTFGAKQ
PTHQGGPAQDRGVYLSLLASLRRRAQLPVVVFTFSRGRCDEQAAGLTSLDLTTSSEKSEI
HLFLQRCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLF
ATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCK
GRVPEMVDLHRMLTGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSK
AHEQALAELTKKLEALEEPDLTGQLVDLSEYYIWGEELTEIRSLIQRRVIESVNGLKSLS
SGRVVVVKNQDHHNALGVILQVSSNSTGRSFTTLVLCDKPLSEDPWDRGSASPGVPYPDD
LVGFKLFLPEGPCDHTVAKLQPRDVAAITTKVLRVNGEKILEDFSKRQQLKFKLDAGEPI
FLGRDYVMGSGRYGWGVSPGLRELLHKRSLRTYSFLRQDPPVAAVTTAVQELLRLSQAYP
AGPPTLDPVNDLQLKDMSVVEGGLRARKLEELIREAQCVHSPRFPAQYLKLRERMQVLKE
MERLRFLLSDQSLLLLPEYHQRVQVLQTLGYVDEAGTVKLAGRVACAMSSHELLLTELMF
DNALSALRPEEIAALLSGLVCQSPGDTGEQLPSTLKQGVERVRAVAKRIGEVQAACGLNQ
TVEEFVGELNFGLVGVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARL
VGEPVLGAKMETAATLLRRDIVFAASLYTQ
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgatggagagggagagacttgtgctatctcccccagatcccctggacctgcctcttcgg
gctgtggagctgggatgcagtgggcgctgggagctcctcaatatagctggggctccagag
agcacccttccgcacaacctccttccctgtgccccagatctgcagcaagaagcagagcaa
ttgtttctgtcatctccagcctggctgcctctgcatggcctggaacactcagctcgaaaa
tggcagcggaagatggatccctggtctctccttgctgtactgggggccccagtcccctct
gacctacaagcccaaagacacccaaccacaggccacatactgggctacaaggaggtcttg
ctggagaatacagacctgtcagccacgacctcattatctcttcgccggccgccagggccc
atctcccagtccctgtgggggaatccaacacaataccctttctggccaggtggaatggat
gagcccaccataacagatctgagcactcgggaggaagccgaggaggagatagactttgag
acagctcttcttactgttccacctggcttcaagaaaggtgtggactttgcaccaaaggat
tacccagctccaactcctgggttgctcagcctcagtcgtctgctagagcccctggatctg
ggtggcggtgatgaagatgagagggaggcaatgggacagccaggaggtaccagaggggac
acagttatggcctctccctgtaatgctcccttggttcgagcaagcagcttggaggaccta
gtgttgaaggaagcttccacaattgcatcctccctagagccccccaaaacccttcctcag
gagcagtgggccattcctgtggatgtcaccacccctgttggtgatttctaccgcctcatt
ccccagccagccttccagtggccgtttgagcctgacgtgttccagaaacaggccatcctg
cacttggaacggcacaactcagtctttgtggcagctcacacatccgcagggaagacagtt
gtggctgaatatgccattgcccttgcccagaagcacatgacacgcaccatctacacttcg
cctatcaaggctttgagtaaccagaagttccgagacttccgaaacacatttggggatgtg
ggactgctcactggggatgtacagctgcactcagaggcctcttgcctcatcatgacgaca
gagatccttcgctccatgctgtacagtggctcagatgtcatccgggacctggagtgggtc
atctttgacgaggttcactacatcaacgatgctgagcgtggggtcgtgtgggaggaggtg
cttatcatgctccctgaacatgtctctgtcatccttctgagtgccactgttcccaacgcc
cttgaatttgctgattggattggacgactgaagcgtcgtcagatctacgtgatcagcact
gtcactcgccccgtccccctagagcattatctctttacggggaacagtcccaagacccag
gacgaactcttcctgttgctggactcccaaggcaccttccacacaaaggggtactatgca
gctgtggaggccaagaaggagaggatgagcaaacacgcccagacctttggggccaagcag
cccacgcatcaggggggcccagcacaggaccgaggtgtgtacctgtccctcctggcttcc
ctccgccgccgtgcacagctgcccgtggtggtgttcaccttttcccggggccgctgtgat
gagcaggctgcgggcctcacctcccttgacctcaccacaagttcagagaagagcgagatt
cacctcttcctgcagcgctgccttgctcgcctccgaggctctgaccgccagctgccccag
gtgctgcacatgtcagagctcctgcaccgaggcctgggcgtgcaccacagcggcatccta
cccatcctcaaggagatcgtggagatgcttttcagccgtggcctggtcaaggtcctgttt
gccactgagacctttgccatgggggtaaatatgccggcccgaacagtggtgtttgattcc
atgcgcaagcacgacggctccaccttccgggacctgctccctggggagtatgtgcagatg
gcaggtagggcaggccggaggggcctggaccccacaggcaccgttatcctgctctgcaag
ggccgagtgcccgagatggtggacctgcaccgaatgctgacgggtaagccatcgcagctg
cagtcgcagttccgcctcacatacaccatgatcctcaacctgttgcgggtggacgccctc
cgggtggaagacatgatgaagaggagcttctcggagtttccgtcccgcaaggacagcaag
gcccatgaacaggctctagctgaactaaccaagaagctggaggccttagaggaacctgac
ctgaccggccaactggtcgacctttccgagtattacatctggggagaagaattgacagag
attcggagcctgatccagcgacgtgtcatagagtctgtgaatgggctgaaatctctctca
tctggaagggtggtggttgtgaagaatcaggatcatcacaatgcactgggtgtgatcctg
caggtctcctcaaactctactggcagatcgttcacaaccctggtcttgtgtgataagccc
ctgtctgaggacccatgggacagggggtcggcctccccaggcgtgccctacccagatgac
cttgtgggattcaagctgttcctgcctgaagggccctgtgaccacactgtggccaagctt
cagcccagagatgtggctgccatcaccaccaaagtgctccgggtgaacggagagaagatc
ttggaggacttcagcaaaaggcagcaactgaaatttaagttagatgctggggaacccatt
ttcctgggaagggactatgtcatggggagtgggaggtatggttggggcgtctcccctggc
ctgagggagctcttacataagagaagtctcaggacctactccttccttaggcaggatcct
cctgttgctgccgtgaccactgctgtccaggaactgctgcgcctgtctcaggcctaccca
gcaggaccccctaccctcgaccctgtcaacgacttgcagcttaaggatatgtcggtggtt
gagggtggactccgtgccaggaagctcgaggagctgatccgggaagctcagtgtgtgcac
agcccccgtttccctgcccagtacctgaagcttcgggagcgaatgcaggtactaaaggag
atggagcggctgcgcttcctactgtcagatcagtcgctgctactgctccccgagtaccac
cagcgagtacaggtgctccaaaccctgggttatgtagacgaggcaggcacagtgaagctg
gcggggcgggtggcttgtgccatgagcagccacgagctgctcctcactgagctcatgttt
gacaacgctctgagtgccctgcggccagaggagattgcagccctgctctctggtctggtc
tgccagagccctggggacactggggaacagctcccaagtaccctcaaacagggagtggaa
cgtgtccgggctgtggccaagcggattggtgaggttcaggcggcctgtggcctgaaccag
acagtggaggaatttgtaggggagctgaattttgggcttgttggagttgtgtacgagtgg
gcccggggcatgcccttctctgagttggcagggctctcggggacccctgagggcctggtg
gtccgctgcatccagcgcctcgccgagatgtgtcggtcgttgcggggggcggcccgcctg
gtaggcgagcctgtgttaggtgccaagatggagacggcagccaccctgctacggagggac
atcgtcttcgcagccagcctctatactcagtga
DBGET
integrated database retrieval system
