Phyllostomus hastatus (greater spear-nosed bat): 123812493
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Entry
123812493 CDS
T07912
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
phas
Phyllostomus hastatus (greater spear-nosed bat)
Pathway
phas03082
ATP-dependent chromatin remodeling
phas04714
Thermogenesis
phas05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
phas00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123812493 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
123812493 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
123812493 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phas03021
]
123812493 (SMARCC2)
03036 Chromosome and associated proteins [BR:
phas03036
]
123812493 (SMARCC2)
Transcription machinery [BR:
phas03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123812493 (SMARCC2)
Chromosome and associated proteins [BR:
phas03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123812493 (SMARCC2)
PBAF complex
123812493 (SMARCC2)
GBAF(ncBAF) complex
123812493 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
123812493
NCBI-ProteinID:
XP_045685231
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHTK
WILDTDTFNEWMNEEDYEVNDDKAPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLSFPDKGKEKP
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTDEARAEGQATEEKKEPKEPREGVGAVEEEAKEKTSEAPKKDEEKGKEGDSEKE
SEKNDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPTVHGLAMA
PASVAPAPPGSGAPPGSLGPPEQIGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQT
PPSLMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPAPSIIPFGSLADSISINLPPPPNLH
GHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAV
QGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacaca
gtgacccagttcgacaacgtgcggctctggctcggcaagaactacaagaagtatatacaa
gctgaaccacccaccaacaagtccctgtctagcctggttgtacagttgctacaatttcag
gaagaagtttttggcaaacatgtcagcaatgcaccgctcactaaactgccgatcaaatgt
ttcctagatttcaaagcaggaggctctctgtgccacatacttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgacttccagaatccatcacgcatggaccgcaat
gtggaaatgttcatgaccattgagaagtccttggttcagaataattgcctgtctcgacca
aacatttttctgtgcccagaaattgaacccaaactgctaggcaaactaaaggacattatc
aagagacaccagggaacggtcactgaagataagaacaatgcttcccatgttgtgtatcct
gtcccagggaacctggaagaagaggaatgggtacgacccgtcatgaagagggataagcag
gttcttctgcactggggctattacccggacagttatgacacgtggatcccagccagtgaa
atcgaagcttctgtggaagatgctccaactcctgagaaacccaggaaggttcacacaaag
tggatcctggacacagacaccttcaatgaatggatgaatgaggaagactatgaagtaaat
gacgacaaagcccctgtctctcgccgaaagaagatttcagccaagacattgacagatgag
gtgaacagccccgattcagatcgacgggacaaaaagggggggaactataagaagaggaag
cgctccccctctccttcaccaaccccagaagctaagaagaaaaatgctaaaaaagggccc
tcaacaccttacacgaagtccaagcgtggccacagagaagaggagcaagaagacctaaca
aaggacatggatgagccctcaccggtccccaacgtagaagaggtgacattgcctaaaaca
gtcaacactaagaaggactcggagtcagccccagtcaaaggaggcaccatgaccgacttg
gatgaacaggaggatgaaagcatggagaccacgggcaaggatgaggatgagaacagtacg
gggaacaagggggagcagaccaagaacccggacctgcacgaggacaacgtgacggagcag
acccaccacatcatcattcccagctacgcagcctggtttgactacaatagtgttcatgcc
attgagcggagggctctcccagagttcttcaacggcaagaacaagtccaagactccagaa
atctacctggcctatcgcaacttcatgattgacacctaccgcctgaacccccaagagtat
ctcacctccaccgcctgccgcaggaacctggcaggcgacgtctgcgccatcatgagggtc
catgccttcctagaacagtggggtctcattaactaccaggtggacgctgagagtcgacca
accccaatggggcctccacccacttctcacttccacgtcttggcggacacgccctcgggg
ctagtgcctctgcagcccaagaccccacagggccgccaggttgatgctgacaccaaggct
gggcgcaagggcaaagagctggacgacctggtgccagagaccgctaagggcaagccagag
ctgcagacctctgcttcccaacaaatgctcagcttccctgacaaaggcaaagagaaacca
acagacatgcagaacttcgggctacgcacagacatgtacacaaagaagaacgtcccctcc
aagagcaaagctgcggccagtgccactcgagagtggacggaacaggagaccctgctactc
ctggaggcactggaaatgtacaaagacgactggaacaaggtatcagagcacgtggggagc
cgcacgcaggacgagtgcatcttgcattttctccgtctccccatcgaagacccgtacctg
gaagactcggaggcctctctgggccccctggcctaccagcccatccccttcagtcagtct
ggcaaccctgtgatgagcactgttgccttcctggcctccgtcgtcgatcctcgagtcgcc
tctgctgccgcgaagtcggctctagaggagttctccaaaatgaaggaagaggtacccacc
gccttggtggaagcccacgttcggaaggtggaagaagcagccaaagtgacaggcaaggca
gaccctgccttcggtttggaaagtagcggtattgccggaaccacctctgatgagcctgaa
cggatcgaggagagcgggactgacgaggcgcgggcggagggccaggccacagaggagaag
aaggagcccaaggaaccccgagaaggagtcggggctgtagaggaagaagcgaaggagaag
accagcgaggctcccaaaaaggatgaagagaaagggaaagaaggtgacagtgagaaggag
tcagaaaagaatgatggggaccccatagttgaccctgagaaggagaaggaaccgaaggag
ggacaggaggaagtgctgaaggaagtggtggagtcagagggggaaaggaagaccaaggtg
gagagggacatcggtgagggcaacctctccactgctgctgccgctgcgctagctgctgcc
gccgtgaaggccaagcacttggctgccgttgaggagaggaagatcaagtctctggtggcc
ctgctggtggagactcagatgaagaagctggagatcaaacttcggcactttgaggagctg
gagacgatcatggaccgagagcgagaagcactggagtatcagaggcagcagctcctggcc
gacaggcaagccttccacatggagcagctgaagtatgcggagatgagggctcggcagcag
cacttccaacaaatgcaccaacagcagcagcagccaccaccagccctgcccccagggtcc
cagcctatcccacctacaggcgctgctgggccacccacagtccatggcttggctatggct
ccggcctctgtggcccctgcccctcctggcagtggggcccctcctggaagcttgggcccc
cctgaacagattgggccacagcagcagcaaccagccggagccccgcagccaggggcagtc
ccaccaggggtaccaccccctggaccccatggcccctcaccgttccccaaccaacaaact
cctccctcattgatgccaggggcagtgccaggcagcgggcacccaggcgtggcgggtaat
gctcctttgggtttgccttttggcatgccgcctcctcctcctcctgctccatccatcatc
ccatttggtagtctagccgactccatcagtattaaccttccccctcctcctaacctgcat
gggcatcaccaccatctcccatttgccccgggcactctccccccacctaacttgcctgtg
tccatggcgaaccctctacatcctaacctgccggcgaccaccaccatgccatcttccttg
cctctcgggccggggctcggatccgccgcagcccagagccctgccattgtggcagctgtt
cagggcaacctcctgcccagtgccagcccactgccagacccaggcacccccctgcctcca
gaccccacggccccgagcccaggcactgtcacccctgtgccacctccacagtga
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