Phyllostomus hastatus (greater spear-nosed bat): 123812924
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Entry
123812924 CDS
T07912
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
phas
Phyllostomus hastatus (greater spear-nosed bat)
Pathway
phas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123812924 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phas03041
]
123812924 (PRPF40B)
Spliceosome [BR:
phas03041
]
Complex A
U1 snRNP components
U1 related factors
123812924 (PRPF40B)
Complex B
123812924 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
WW_2
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
123812924
NCBI-ProteinID:
XP_045685809
LinkDB
All DBs
Position
Unknown
AA seq
906 aa
AA seq
DB search
MSVPDSGPRPPAAPAPFPPGPPMMPPPFMPPPGIPPPFPPMGLPPMSQRPPAIPPMPPGI
MPPMLPPMGSPPPITQIPGMVPPMMPGMLMPAVPVTAATAPGVDTASSAVAGTVPPRALW
SEHVAPDGRIYYYNADDKQSVWEKPSVLKSKAELLLSQCPWKEYKSDTGKPYYYNNQSKE
SRWTRPKDLDDLEALVKQEAIGKPQPQTQQTLQPQPPQPQPDPPPAPPCPTPVPVGLLEP
EPGGSEDCDVSDATQTLEQGFSQQPEEGPSSSAGLHQPPQQEEEESKPEPERSGLSWSNR
EKAKQAFKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNAYKAQREKEEK
EEARLRAKEAKQTLQHFLEQHEHMTSTTRYRRAEQTFGELEVWAVVPERDRKEIYDDVLF
FLAKKEKEQAKQLRRRNIQALKSILDGMSSVNFQTTWSQAQQYLMDNPSFAQDHQLQNMD
KEDALICFEEHIRALEREEEEERERARLRERRQQRKNREAFQTFLDELHETGQLHSMSTW
MELYPAVSTDVRFANMLGQPGSTPLDLFKFYVEELKARFHDEKKIIKDILKDRGFCVEVN
TAFEDFAHVISFDKRAAALDAGNIKLTFNSLLEKAEAREREREKEEARRLRRREAAFRSM
LRQAVPALELGTAWEEVRERFVCDSAFEQITLESERIRLFREFLQVLETECQHLHTKGRK
HTRKGKKHHRKRSHSPSGSESEEEELPPPSLRPPKRRRQNPSESGSEPSSSLDSVESGGA
VLGGRGSPSSRLLLGSDHGLRKAKKPKKKTKKRRHKSNSPESVTDPEEKAGKESDEKEPE
QDKDRELRLTELPNRSPGFGIKKEKVRGRCLAPAQAVLCPGLHGPQGRLWVSCAFAPPDG
LGHVRK
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttcccgattctggtccccggcccccagcagcgcctgcccccttcccaccgggg
ccccccatgatgccaccacccttcatgccccctccgggaatccccccgccctttcctccg
atggggctaccccccatgagtcagaggccaccagccatcccccccatgccaccaggcatc
atgcccccaatgctaccaccaatggggtcaccaccaccaatcacacagataccgggaatg
gtgcctcccatgatgccaggaatgctgatgccagcggtgcccgtcaccgcagcgacggct
ccaggtgtggacaccgccagctctgctgtggctgggacagtccctccgagggccctatgg
agtgagcatgtggcccctgacgggcgcatctactactacaatgctgacgacaagcagtcc
gtgtgggagaagcccagcgtgctcaagtccaaggcagagctgttgctgtcccagtgtccc
tggaaagagtacaagtcggacacaggcaaaccctactactataacaaccagagtaaggag
tcccgttggacccggccaaaggacctggatgacctggaggctctagtcaaacaagaggcc
atagggaagccacagccacagacacagcagacactacagccgcagccccctcagccacag
cccgaccctccacctgcgcctccttgccccaccccagtgcctgtgggcctcctagaacct
gagccaggtgggagtgaagattgcgatgtgtcggatgccacccagaccttggagcagggg
ttctcgcagcagccagaggagggccccagcagttctgctggactgcatcagccaccacaa
caggaggaagaggaatcaaagccagaaccggagaggtctggtctcagttggagcaaccgg
gagaaggcaaaacaggcctttaaggagctgctgagggacaaggctgtcccctccaatgcc
tcttgggaacaagccatgaagatggtggtcactgacccccgttacagtgccttgcccaaa
ctgagtgagaaaaagcaggcattcaatgcatacaaggcgcagcgggagaaggaagagaaa
gaggaggcccggctgagggccaaggaggctaagcagactttgcagcacttcttggagcag
cacgagcacatgacctccaccacccgctaccggagggcagaacagacctttggggagctg
gaggtctgggctgtggtccccgagagggatcgaaaggagatttatgatgatgtcctcttc
ttcctggccaagaaggagaaggaacaggccaagcagctccggcgccgcaatatccaggcc
ctgaagagcatcctggatgggatgagtagcgtcaacttccaaaccacatggtcccaggcc
cagcagtacctcatggataaccccagctttgctcaggaccatcagcttcagaacatggac
aaggaagatgcgctgatctgctttgaggagcacatccgagctttggagagggaggaggag
gaggaacgggaacgggcccggcttcgggagcggcgccagcagcgcaagaaccgggaggcc
ttccagaccttcctggacgagctgcacgagacagggcagctgcactccatgtccacctgg
atggaactgtacccggcggtcagcactgatgtccgctttgccaacatgctgggccagccg
ggctccacccctctggacctgttcaagttctatgtggaggagttgaaggcacgattccac
gatgagaagaagatcattaaggacatccttaaggaccggggcttctgtgtggaggtgaac
acagcctttgaggacttcgcccacgtcataagctttgacaagagggctgctgcgctggac
gcaggcaacatcaagctgaccttcaatagtctactggagaaggcagaagcgcgggagaga
gagcgagagaaggaggaagcacgaaggctgcggcgcagggaagctgcctttcgaagcatg
ctgaggcaggccgtgcctgctctggagctgggcactgcctgggaagaggtccgtgagcgc
tttgtgtgcgactcagcctttgagcagatcaccctggagtcggagcggatccggctcttc
cgggagttcctgcaggtactagagactgagtgccagcacctccacaccaaaggccgaaag
cacaccagaaagggcaagaagcaccatcgcaagcgttcccactcgccctcaggctctgag
tcggaagaggaggagctgcccccaccatctctccggccccccaagcggaggcggcagaac
ccctccgaatctggctctgagccctcttcctcacttgattcagttgaaagtgggggtgct
gtccttggaggacggggctccccatcctcccgccttctcctaggatcagatcatggcctt
cggaaagccaagaaaccaaaaaagaaaactaaaaagagaagacacaagtcgaacagtccc
gagagtgtgacagaccctgaggagaaagctggcaaggagagtgatgagaaagaaccagaa
caggacaaggacagggagctccggctgacagagctccctaatcgctccccaggttttgga
atcaagaaggagaaggtgagaggcaggtgcctggccccagcccaggcagtgctctgtcca
ggcctccacggccctcaggggaggctgtgggtgagctgtgcctttgctcccccagacggg
ctgggacacgtcagaaagtga
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