Phyllostomus hastatus (greater spear-nosed bat): 123813228
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Entry
123813228 CDS
T07912
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1 isoform X1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
phas
Phyllostomus hastatus (greater spear-nosed bat)
Pathway
phas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123813228 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phas03019
]
123813228 (XAB2)
03041 Spliceosome [BR:
phas03041
]
123813228 (XAB2)
Messenger RNA biogenesis [BR:
phas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123813228 (XAB2)
Spliceosome [BR:
phas03041
]
Complex B
Other components
Prp19-related factors
123813228 (XAB2)
Complex C
123813228 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_2
TPR_8
Suf
TPR_19
ARM_TT21
ARM_TT21_C
TPR_15
TPR_1
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
123813228
NCBI-ProteinID:
XP_045686178
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MVVMARLSRQERPDLVFDEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAQMETASELGREEDDDVDLELRLARFEQLIGRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEENGQLDDARVILEK
ATRVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPRYAKTLYLLYA
QLEEEWGLARHAMAVYERATQAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
REMLRIRRSVQATYNTQVNFMASQMLKVSGSAAGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAEHDQPTRAQNKILFVRSDASREELAELAQQANPEEIELGEDEDDDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcatggcgcgactttcgcggcaggagcggccggatctggtctttgatgaagaa
gacctcccctacgaggaggaaattatgcggaaccagttctccgtcaagtgctggctccgc
tacatcgagttcaaacagggggccccgaagcccaggctcaatcagctatacgagcgagcc
ctgaagctgctgccctgcagctacaagctctggtaccgctatctgaaggcgcgccgggca
caggtgaagcatcgctgtgtcaccgaccccgcctacgaagacgtcaacaactgccacgag
agggccttcgtgttcatgcacaagatgccgcgcctgtggctggactactgccagttcttg
atggaccagggccgcgtcactcacacccgccgcacctttgaccgtgccctccgggcactg
cccatcactcagcactctcgtatttggcccctgtacctgcgcttcctgcgctcgcacccc
cttcctgagacggctgtgcggggctaccggcgcttcctcaagctgagccctgagagcgca
gaggagtacatcgagtacctcaagtccagcgaccggctggatgaggccgcacagcgcctg
gccactgtggtgaatgacgagcgcttcgtgtccaaggctggcaagtccaactatcagctg
tggcacgagctctgtgacctcatctcccagaacccggacaaggtgcagtcgctcaacgtg
gacgccatcatccgagggggcctcacccgcttcactgaccagctggggaagctctggtgc
tcgctggccgactactacattcgcagtggccactttgaaaaggctcgggatgtctatgag
gaggccatccggaccgtgatgaccgtgcgggacttcacccaggtgttcgacagctacgcc
cagtttgaggagagcatgattgcagctcagatggagaccgcctctgagctggggcgggag
gaggatgatgatgtggacctggagctgcggctggcccgcttcgagcagctcatcggccgg
cggcccctgctgctcaacagcgtcctgctgcgccagaacccacaccacgtgcatgagtgg
cacaagcgtgtggccctgcaccagggccgcccccgggagatcatcaacacgtacacagag
gctgtgcagacagtggaccccttcaaggccacgggcaaaccccacacgctgtgggtagcg
tttgcgaagttctatgaagaaaacgggcagctggatgatgcccgagtcatcctggagaag
gccaccagggtgagcttcaagcaggtggacgacctggccagcgtgtggtgcgagtgtggc
gagctggagctccggcacgagaattacgaccaggccttgcggctgctgcggaaggcaacg
gcgctgcctgcccgccgggctgaatacttcgatggctcggagcctgtgcagaaccgcgtg
tacaagtccctgaaggtgtggtccatgcttgccgacctggaggagagccttggcaccttc
cagtccaccaaggccgtgtatgaccgcattctggacctgcgcattgccacaccccagatt
gtcatcaattacgccatgttcctggaggagcacaagtacttcgaggagagcttcaaggcg
tacgagcgtggcatctcgctgttcaagtggcccaacgtgtccgacatctggagcacctac
ctgaccaagttcattgcccgctatgggggccgcaagctggagcgggctcgggacctcttt
gagcaggcactggatggctgccccccaagatacgccaagaccctgtacctgctgtacgca
cagctggaggaggagtggggcctggcccggcatgccatggctgtgtacgagcgtgccacc
caagctgtggagcctgcccagcagtacgacatgttcaacatctacatcaagcgggccgcg
gagatctacggagtcacccacacccgtggcatctaccagaaggccattgaggtgctgtcg
gacgagcacgcccgggagatgtgtctgcggtttgcagacatggagtgcaagctgggagag
attgaccgcgcccgggccatctacagcttctgctcccagatctgtgacccccggacaact
ggggctttctggcaaacatggaaggactttgaggtgcggcacggcaatgaggacaccatc
cgggagatgctgcgcattcgccgcagcgtgcaggctacatacaacacgcaggtcaacttc
atggcctcccagatgctcaaggtgtcaggcagcgctgcgggcactgtgtctgacctggcc
cctgggcagagcggcatggatgacatgaagctgctcgagcagcgggccgagcagctggcg
gccgaggctgagcacgaccagcccacacgggcccagaacaagatcctgttcgtgaggagc
gacgcgtcccgggaggaactggccgagttggcccagcaagccaacccagaggagatcgag
ctgggcgaggacgaggatgacgacgagatggacctggagcccaacgaggtgcggctggag
caacagagcgtgccggctgctgtatttgggagtctgaaggaagactga
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