Phyllostomus hastatus (greater spear-nosed bat): 123815107
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Entry
123815107 CDS
T07912
Symbol
PABPC1L
Name
(RefSeq) polyadenylate-binding protein 1-like
KO
K13126
polyadenylate-binding protein
Organism
phas
Phyllostomus hastatus (greater spear-nosed bat)
Pathway
phas03015
mRNA surveillance pathway
phas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phas00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123815107 (PABPC1L)
09123 Folding, sorting and degradation
03018 RNA degradation
123815107 (PABPC1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phas03019
]
123815107 (PABPC1L)
03041 Spliceosome [BR:
phas03041
]
123815107 (PABPC1L)
Messenger RNA biogenesis [BR:
phas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123815107 (PABPC1L)
mRNA cycle factors
Stress granule specific factors
123815107 (PABPC1L)
Spliceosome [BR:
phas03041
]
Complex C
Other components
Complex C specific factors
123815107 (PABPC1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
123815107
NCBI-ProteinID:
XP_045689259
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MHASGAGLPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVVTRRSLGYAYINFQ
QPADAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEESIDNKALYDTFS
AFGNILSCKVVCDSHGSRGFGFVHFETYEAAQKAIRTMNGMLLNDRKVFVGHFKSRWERE
AELGAGAAEFTNVYVKNLQVDVDEQGLGQLFSPFGKMLSVKVMRDDSGCSRGFGFVNFEK
HEEAQKAVTDMNGKEVSGRLLFVSRAQKRAERQNELKQRFEQMKQDRLNRYQGVNLYVKN
LDDSIDNEKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRILGT
KPLYVALAQRKEERKAVLTNQCMQQRLCAQALGGPLLGSFQQPTSYFLPTVPQPPAQAVY
YGSGPPGPPVQPAPRWMAQPPRSSPTYPPAASMGQPPATSPCPLAPISSVRKGPPQMPQQ
VALTQRVANIGTQTTGPSEAGHSTPRRPLPTHRCSSTHGVPEPAAGLPGREPLTASMLAK
APLRKQKQMIGEHLHPLIYDVHTQLAGRITGMLLEIDDSELLLMLESPEPLSAKVEEAMA
VLQAHQATEWAKVNVTETRKWNSHSLG
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcacgccagcggagcgggtctcccgctcgcctctctctacgtgggcgacctgcatcca
gacgtgaccgaggccatgctctacgagaagttctcgcccgcgggtcccatcctgtccatc
cgcgtgtgccgcgacgtggtcacccgccgctcgctgggctatgcctacatcaacttccag
cagccggccgacgccgagcgggcactggacacaatgaacttcgaggtgatcaaaggccag
cccatccgcatcatgtggtcccagcgagaccccgggcttcgcaagtcgggcgtgggcaac
atcttcatcaagaacctggaggagtccattgacaacaaggccctgtatgacaccttctcc
gcctttgggaacatcctctcttgcaaggtggtgtgtgacagtcacggctcccgaggcttt
ggctttgtccattttgagacctacgaggccgcacagaaggccatccgcaccatgaatggg
atgctgctgaatgaccgcaaagtcttcgtgggccacttcaagtcccgatgggagcgggag
gctgagctgggggcgggggccgcggagttcaccaacgtctacgtgaagaacctccaagtg
gacgtggacgagcagggcctggggcagctcttctccccgtttgggaagatgctgagcgtg
aaggtgatgagggatgacagcggctgctcccgaggctttggctttgtcaactttgagaag
catgaggaagcccagaaggctgtgacggacatgaatgggaaggaggtgagtgggcggctg
ctcttcgtgagccgggcccagaagcgggcggagcggcagaacgagcttaagcaaaggttc
gagcagatgaagcaggaccggctgaaccgttaccagggcgtgaacctgtacgtgaagaac
ctggatgactccatcgataatgagaaactgaggaaagagttctctccctacggagtgatc
accagtgccaaggtgatgacagagggtggccacagcaaagggtttggctttgtgtgtttt
tcctctccagaagaggcaacgaaggccgtgaccgagatgaacgggcgcatcctcggcacc
aagccgctgtacgtggcgctggcccagcgcaaagaggagcggaaggccgtcttgaccaac
cagtgcatgcagcagcgcctctgcgcgcaggccctgggcggccccctcctgggctccttc
cagcagcccaccagctacttcctgcccaccgtgccccagcctccagcccaggctgtgtac
tatggctctggcccccctggcccccctgtccagcctgcccccaggtggatggcccagcct
cctagatcctcccccacctaccctccagccgcctcaatgggccagccgccagccacgtct
ccgtgccccctggcccccatcagcagcgtcaggaagggccccccccagatgccacagcag
gtggccctcacccaaagagtggccaacatcggtacccagaccaccgggcccagcgaggca
ggacactctacgccaaggaggcctctcccgacacacagatgctccagcacccatggggtc
ccggagcctgctgcgggcctccccggacgggagcccctgactgcgtccatgctggccaag
gcgccactccgcaaacaaaagcagatgattggtgagcatctccacccacttatctacgat
gtccacacccagctggctggcaggatcacgggcatgctgctggagatcgacgactcggag
ctgctgctcatgctggagtccccggagcccctcagtgccaaggtggaagaggcgatggcg
gtgctgcaggctcaccaggccaccgagtgggcgaaagtgaacgtgactgaaaccagaaaa
tggaactctcactcccttggctga
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integrated database retrieval system
