Phyllostomus hastatus (greater spear-nosed bat): 123816644
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Entry
123816644 CDS
T07912
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
phas
Phyllostomus hastatus (greater spear-nosed bat)
Pathway
phas03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
123816644 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phas03400
]
123816644 (LIG3)
Enzymes [BR:
phas01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
123816644 (LIG3)
DNA repair and recombination proteins [BR:
phas03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
123816644 (LIG3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Synaptonemal_3
mRNA_cap_enzyme
SDE2_2C
FMP23
Motif
Other DBs
NCBI-GeneID:
123816644
NCBI-ProteinID:
XP_045691614
LinkDB
All DBs
Position
Unknown
AA seq
1012 aa
AA seq
DB search
MTLTFKILFRATFRALCRKEPCLFRKRLWPDVKQFSQWPETDRLHGRRLLQKREPVLSFQ
NGRLRPHATRLVSSPGSHAGLCGEPCEMAEQRFCVDYAKRSTAGCKKCKEKIVKGVCRIG
KVVPNPFSESGGEMKEWYHVKCMFEKLERARATTKKIEDLTELEGWEELEDGEKEQISQH
IADLSSKAGGTPKKKAVVQARLTATGQVTSPGKGPSVVPGTHPRKFSGFAARPNNSGEAC
PSPTPKRSLSSSKCDPKHRDCLLREFRKLCAMVAENPSYNTKTQIIQDFLRKGSSGDGFH
GDVYLTVKLLLPGVVKSVYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETVRVFFEQ
SASFPPAAKSLLTIQEVDEFLLRLSRLSKEDEQQQALQDIASRCTANDLKCIIRLIKHDL
KMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLHNEQEVEKEPGRRRTLSVQASLMTP
VQPMLAEACKSIEYAMKKCPNGMFSEIKYDGERVQVHKSGDHFSYFSRSLKPVLPHKVAH
FKDYIPRAFPGGHSMILDSEVLLIDNQTGRPLPFGTLGVHKKAAFQDANVCLFVFDCIYF
NEVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVSKASDLVDMINRVIREGLEGLVLK
DVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPSS
QKWCTVTKCSGGHDDATLARLQKELDMVKISKDPSKIPSWLKVNKIYYPDFIVPDPKKAA
VWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKERADFTV
VAADEGSSPAGGSSGENEGASGPSQKARASPEQPPTSAKKARGKLRHSGSGGGHTPIAEP
SPVRGAERPGVKTPVKVGEKRKASDETPCPAKVRRVLLDIFTGVRLYLPPSTPDFSRLRR
YFVAFDGDLVQEFDVASATHVLGSGDKNPEAQQVSPEWIWACIRKRRLVAPC
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgactttgacgttcaagatcctcttccgggcgaccttccgtgcgctctgccgtaaagaa
ccgtgcctgttccggaagcgtctctggccggacgtaaagcagttcagccagtggccagag
acagatcggcttcatgggcgccgcctcctgcagaagagagagcccgttctgtccttccaa
aacggccgtctgagaccgcacgccacccgcctcgtctcctcgccagggtcgcatgcggga
ctctgcggcgagccctgcgagatggccgagcagcggttctgcgtggactatgccaagcgc
agcacggctggctgcaagaaatgcaaggagaagatcgtgaagggcgtgtgccgcatcggc
aaagtggtgcccaaccccttctccgagtccgggggggagatgaaggagtggtaccacgta
aaatgcatgtttgagaagctggagcgggcccgggccaccacgaagaagatcgaggacctc
acggagctggaaggctgggaggagctggaagacggcgagaaggagcagataagccagcac
attgcagatctgtcttccaaggcgggaggcacgcccaagaagaaagccgtggtgcaggcg
aggctcacggccaccggccaggtgacgtctccggggaaagggccttcggtggtccccggc
acccacccccggaagttttctggctttgcagccagacccaacaactccggggaggcctgc
ccaagccccacgccgaagagaagtctctcctcgagcaagtgcgaccccaagcacagggac
tgtctgctgcgcgagtttcggaagctgtgcgccatggtggccgagaatcccagctacaac
acgaagacccagatcatccaggacttcctccggaaaggctcctcgggagatggtttccat
ggtgacgtgtacctcacggtgaagctgctgctgcccggtgttgttaagagtgtttacaac
ctgaacgataagcagattgtgaagcttttcagccgcatctttaactgcaacccggacgac
atggcgcgagacctggagcagggagacgtgtcggagaccgtccgggtcttcttcgagcag
agcgcctcgttcccgcccgccgccaagagcctgctcaccatccaggaggtggacgagttc
ctgctgcggctctccaggctcagcaaggaggatgagcagcagcaggccctgcaggacatc
gcctccaggtgcacagccaacgacctcaaatgcatcatcaggttgatcaagcacgacctg
aagatgaactcaggtgccaaacacgtgttagacgccctcgaccccaatgcctatgaagcc
ttcaaagcctcgcgcaacctgcaggacgtggtggagcgggtcctccacaacgagcaggag
gtggagaaggagccgggccgcaggcggacgctcagcgtgcaggcctccctgatgaccccg
gtgcagcccatgctggccgaggcctgcaagtccatcgagtacgcgatgaagaagtgtcct
aacggcatgttctcggaaatcaagtacgacggggagcgcgtgcaggtgcacaagagcggg
gaccacttcagctacttcagccgcagcctcaagcccgtcctgccccacaaggtggcccac
ttcaaggactacatcccccgggctttcccggggggccacagcatgatcctggactcggag
gtgctcctgatcgacaaccagacgggcaggccgctgcccttcgggacgctgggcgtgcac
aagaaagccgccttccaggacgccaacgtctgcctgttcgtcttcgactgtatctacttc
aacgaggtcagcttgatggacaggcctctgtgcgagcggcggaagttccttcacgacaac
atggtggaaatccccaaccggatcatgttctcggaaatgaagcgcgtgtccaaagcgtcg
gacctggtcgacatgatcaaccgcgtgatccgggaggggctggaggggctggtgctgaag
gacgtgaagggcacctatgagcctggaaagcggcactggctgaaagtgaagaaagactat
ttgaacgagggggccatggctgacacagctgacctggtggtccttggggccttctacggg
caggggagcaaaggtggcatgatgtccatcttcctcatgggctgctacgacccgagcagc
cagaagtggtgcacggtcaccaagtgctcggggggccacgacgacgcgacgctggcccgc
ctgcagaaggagctggacatggtgaagatcagcaaggaccccagcaagatccccagctgg
ctgaaggtcaacaagatctactaccctgacttcatcgtcccagacccaaagaaagccgcc
gtgtgggagatcacaggggccgagttctccaagtccgaggcgcacacggccgatggcatc
tccatccgcttccctcgctgcacccgaatccgggacgataaggactggaaatctgccact
aacctcccccaactcaaggagctgtaccagctgtccaaggagagggcggacttcaccgtg
gtggccgcggacgaggggagctcccccgcggggggcagcagcggggagaacgagggggcc
tcggggccgtcccagaaggccagagcctccccggagcagccccccaccagtgccaagaag
gcccgggggaagctgcgtcactctggcagcggaggcggccacacgccgattgcagagcct
tcccctgtgagaggggcggagaggccgggcgtgaagactcctgtgaaggtgggggagaag
cgcaaggcctctgacgagaccccgtgcccggcaaaagtgaggagggtgctgctggacatc
ttcaccggggtgcggctctacctgccgccctccacacccgacttcagccgtctcagacgc
tactttgtggcatttgatggggacctggtacaggaatttgacgtggcctcggccacacac
gtgctgggcagcggggacaagaaccctgaggcccagcaggtctccccagagtggatttgg
gcttgtatccggaaacggagactggtcgctccctgctag
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integrated database retrieval system
