Phyllostomus hastatus (greater spear-nosed bat): 123818287
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Entry
123818287 CDS
T07912
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
phas
Phyllostomus hastatus (greater spear-nosed bat)
Brite
KEGG Orthology (KO) [BR:
phas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phas03000
]
123818287 (RC3H1)
04121 Ubiquitin system [BR:
phas04121
]
123818287 (RC3H1)
Transcription factors [BR:
phas03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
123818287 (RC3H1)
Ubiquitin system [BR:
phas04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123818287 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
zf_CCCH_4
zf-CCCH_4
FYVE
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
123818287
NCBI-ProteinID:
XP_045694306
LinkDB
All DBs
Position
Unknown
AA seq
1119 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQPPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQTHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPAAAVLPDD
GAVDLPGRKPPALPNGIVSAGNTVTQLIPRGTDPSYDSSLKPGKMDHLSSSAPGSPPDLL
ESVPKSIPALAVNPHPVPPRGPTDLPPMPVTKPLQMVPRGSQLYPAQQADVYYQDPRGAA
PPFEPAPYQQGMYYTAPQCVSRFVRPPPSAPEPAPPYLDHYQPYLQDRVINPPYGTQPHQ
YPPMYPPHCDGRRVYPAQSYPREEIFRESSIEIPPPAVPSYVPESRERYQQVEGYYPVAP
HPAQIRPSYIRETPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLP
PPFHPEEFLDEDLKAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDAVAAGSAEMMNVE
SKGVRDQRLDHQRRATETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPLQAMAPQGA
PTKSMNMPDYSPYGAHGGWGGSPYSPHQSAASQAHFSERERISMSEVASHGKPLPSADRE
QLRLELQQLNHQISQQTQLRGLEREASTLASQSQPPPAPPKWPGMISSEQLSLELHQVER
EIGKRTRELSLENQCSLDMKSKLNTSKQAENGQPEPQNKVPAEDLTLTFSDVPNGSALTQ
ESIGLLSNQTSSLNLSEDPEGGGDNNDSQRPGVAPSPAP
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacagtggacggatttcctttcctgcccgatttgcactcagact
ttcgacgaaacaattcgaaagcccatcagtttgggttgtggccatactgtctgcaagatg
tgcctgaataaactccaccgcaaggcttgccctttcgaccagaccactatcaatacagac
attgagctcctcccggtgaactcggcattgctgcagctagtgggtgctcaggtccctgag
cagccgcccattactctgtgtagtggggtggaagatacaaagcattatgaggaagccaag
aagtgtgtggaagaattagcattgtacctgaaaccactcagcagtgctagaggagtgggt
ctgaacagcacgactcagagtgttctgagtcgcccgatgcagaggaagctggtgactctg
gtccactgccagctcgtggaagaagagggcaggattcgtgccatgcgggcagcccggtct
ttgggcgaacggacagttacagagctcatcctccagcaccagaaccctcaacagctctct
tccaatctttgggcagcagtcagggcccggggctgccagttccttggaccagcaatgcag
gaggaagctctgaagctggttctcctggccttagaagatggctctgctctgtccagaaaa
gtgctggttctctttgtggtgcaaaggctggagcctcggttcccgcaagcctccaaaact
agcattgggcatgttgtccagctcctttaccgggcctcctgcttcaaggtcaccaaacgc
gacgaagactcttctctgatgcagctgaaggaagaatttagaacctatgaagcgctgcgg
cgagagcacgactcccagatcgtgcagatagcgatggaagcaggcctgcgcatcgcgcca
gaccagtggtcctcgctgctgtacggagaccagacccacaagtctcacatgcagtccatc
attgacaagttgcagactccagcctcttttgcacaaagtgttcaggaactaacgattgct
ctccagcggactggagacccagcaaacttgaaccgcctgaggccccatttggagctacta
gcgaacatcgaccctagtccagatgctcctcctcctacttgggagcagctggaaaacggg
ctggtcgccgtgcgcacggtggtacatggtctggtggactacatccagaaccacagcaag
aaaggagccgaccagcagcagcctccgcagcatagcaaatataaaacgtacatgtgtcga
gacatgaagcagagaggaggatgccctcgtggggccagctgtacatttgcacactcccag
gaggaactggaaaaattccgtaagatgaacaaacgcctagttcccagaagacccctgagc
gcctctttgggtcagctgaatgaggtgggcctgcctgcggcggccgtcctcccggacgac
ggcgccgtggatctgcccggcagaaagccccccgctctgcccaatgggattgtgtcagca
ggaaacacggtcacgcagctgatcccacgagggacggaccccagctacgactccagtctg
aaaccagggaagatggatcatctgagcagcagcgcccccggatcccctcctgacctgcta
gaatcggtccccaagagcatccctgccctagctgtgaacccgcatcccgtacctccacgg
ggcccgacagacctgcctcccatgcccgtcaccaaaccgctccagatggtgccgcggggc
tctcagctgtaccccgcgcagcaggcggacgtctactatcaggaccctcggggagcggct
ccgcccttcgagcctgcgccctaccagcagggtatgtactacactgcaccgcagtgcgtg
tcccgcttcgtgcgacctccgccgtctgctcctgagcccgcacctccctacctggatcat
taccagccctacctccaggaccgcgtcataaaccctccgtacggcacgcagccgcaccag
tacccgcccatgtacccgccgcactgtgacggccgccgagtgtaccctgctcagtcttac
cccagagaggagatcttccgggaaagttctattgagattccacctccggcagtaccgtcc
tacgtgcccgagtccagggagcggtaccagcaggtggagggctactacccggtggctcct
catccagcgcagatcagaccttcgtacatcagagagacgccctacagccggctccctccc
ccgccccagccccaccccagtctggacgagctgcaccggagacggaaggaaatcatggcg
cagctggaggaaaggaaggttatctcccctccgccgtttgcgccctcacccacgctgccc
ccgcccttccacccagaggaatttttggatgaagacttgaaggccgggaaatacaaagga
aatgattatagccagtactctccctggtcatgtgacaccatcggctcctacattggaacc
aaagatgcaaaacccaaagacgctgtggcagcagggagtgcggaaatgatgaacgtggag
agtaagggagtgcgagaccagcggctggaccaccagagaagagctaccgaaaccagtgac
gacgacctcatcccgtttggggaccggccgacagtctcgcggtttggtgccatctctcga
acctccaaaacaatataccagggtgctggcccgttgcaggcgatggcacctcagggagct
cccacaaaatctatgaacatgccagactacagtccgtacggagcccacggcggctggggc
ggctccccgtactccccgcaccagagcgcggcgtctcaggcacacttcagtgagagggag
aggatatccatgtcggaagtggccagtcacggaaaaccccttccgtccgccgacagggag
cagctgcgactggaactgcagcaactgaaccaccagatcagccagcagacccagctgcgt
ggactggagagggaggcgagcaccctggcaagccagtcgcagcccccgccagcaccgccg
aagtggcctggaatgatctcgagtgagcagctgagcctggaactgcaccaggtggagcgg
gaaatcgggaagagaacccgggagctgagcctggagaaccagtgttctctggacatgaaa
agcaaattgaatacaagtaagcaagcagaaaacggacaaccggaaccccaaaataaggtt
ccagctgaggaccttacattgacattcagtgatgtacccaatggatcggccttgacacaa
gagagtatcggcctcctgtcaaaccagaccagctctctgaacctgtcggaggaccccgag
ggaggaggggacaacaacgactcccagaggccaggggtcgcgcccagccctgctccctga
DBGET
integrated database retrieval system
