Phyllostomus hastatus (greater spear-nosed bat): 123822135
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Entry
123822135 CDS
T07912
Symbol
PRKN
Name
(RefSeq) E3 ubiquitin-protein ligase parkin isoform X1
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
phas
Phyllostomus hastatus (greater spear-nosed bat)
Pathway
phas04120
Ubiquitin mediated proteolysis
phas04137
Mitophagy - animal
phas04141
Protein processing in endoplasmic reticulum
phas05012
Parkinson disease
phas05014
Amyotrophic lateral sclerosis
phas05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
phas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123822135 (PRKN)
04120 Ubiquitin mediated proteolysis
123822135 (PRKN)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
123822135 (PRKN)
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
123822135 (PRKN)
05014 Amyotrophic lateral sclerosis
123822135 (PRKN)
05022 Pathways of neurodegeneration - multiple diseases
123822135 (PRKN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phas04131
]
123822135 (PRKN)
04121 Ubiquitin system [BR:
phas04121
]
123822135 (PRKN)
03029 Mitochondrial biogenesis [BR:
phas03029
]
123822135 (PRKN)
Enzymes [BR:
phas01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
123822135 (PRKN)
Membrane trafficking [BR:
phas04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
123822135 (PRKN)
Aggrephagy
Other aggrephagy associated proteins
123822135 (PRKN)
Xenophagy
Other xenophagy associated proteins
123822135 (PRKN)
Ubiquitin system [BR:
phas04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
123822135 (PRKN)
Mitochondrial biogenesis [BR:
phas03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
123822135 (PRKN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_12
zf-RING_14
ubiquitin
Rad60-SLD
Crinkler
Motif
Other DBs
NCBI-GeneID:
123822135
NCBI-ProteinID:
XP_045700020
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MIGTWCLSVFVRFNSSHGFPVEVDPTTSIFQLKEAVAKRQGVPADQLRVIFAGKELRNDL
VVQGCDLDQQSIVHVVLRPAREGPEMTSAPGSGGRPWSASGASRREPESLTRVDFSGSVL
PTDSVGLAAILVEDTENIAPPAGRPAGRPAYNSFYVYCKGPCGGVQPGKLRVRCGTCGQA
TLTLAQGPSCWEDVLVPDRMRGECQSPGCPGTRAEFFFKCGAHPTSDQETSVALNLITTN
SRNITCITCADVRSPVLVFQCDSRHVICLDCFHLYCVTRLNDRQFIHDPQLGYSLPCVVQ
PVPALRRGGVRAADGGRAVPPAGLRGRAAAGARAEGSHLRRRRRPGLRTRLLPGLRGSGA
RRRVQRASRLSGRGSGLQGGREGSRASAVGGVLQRDHQANHQALPALPGARGEKRRVHAH
EVPAAPVPAGLVLALRLRVEPHLHGRPLVRRVAAAGRAAIGPGAPRPARIGDSPSLHTCT
RAHTGSCNQIHRHTHMHIHLHMHAHTTHVPPTLMHMCMHKCTHIIHALMHTPTHAHVCAH
MRTHAYTLYSRAQERVSTRVCTHTCAHRHPVLSAITEAARERPGPPSASPWKPPCGH
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgatcggtacgtggtgcctgtcagtgtttgtgaggttcaactccagccacggcttcccg
gtggaggtggatcccaccaccagcatcttccagctcaaggaggcggttgctaagcgacag
ggggttccagccgaccagctgcgggtgatcttcgcggggaaggagctccgcaacgacctg
gtggtgcagggctgcgacctggaccagcagagcatcgtccacgtggtgctgagacccgcg
agggaaggcccggaaatgacctccgcccccggcagcgggggccgtccctggagcgcctcg
ggggcctctcggagggagcccgagagcttaactcgcgtggacttcagtggctctgtcctc
ccgaccgactcggtgggtctggcggccatcctggtcgaagacacggagaacatcgccccg
ccagccggacgcccagcaggtcgaccggcctacaacagcttctatgtttactgcaaaggc
ccctgcggaggagtgcagccagggaagctcagggtgcgctgcggcacctgcggacaagcc
acgctcaccttggcccagggcccgtcctgctgggaggacgtcttggtccccgaccggatg
cgaggcgagtgccagtctccaggctgcccgggcaccagagcggagtttttctttaaatgc
ggagcacacccgacctctgaccaagaaacgtccgtcgctttgaacctgatcacgacgaac
agccggaacatcacctgcataacgtgcgcggacgtcaggagcccggtcctggtgttccag
tgcgactcccgccacgtgatctgcctggactgcttccacctgtactgcgtgaccaggctg
aacgaccggcagttcatccacgaccctcagctcggctactctctgccttgtgtggtacaa
ccggtaccagcactacggcgcggaggagtgcgtgctgcggatggggggcgtgctgtgccc
ccggccgggctgcggggccgggctgctgccggggccagagcagagggaagtcacctgcgg
aggcggcgacggcctgggctgcggactcgtcttctgccgggactgcggggaagcggcgca
cgacggcgagtgcagcgcgccagccgcctcagtggccgtggctcaggtctacagggtgga
cgagaaggcagccgagctagcgcggtgggaggagtcctccaaagagaccatcaagcaaac
caccaagccctgcccgcgctgccgggtgcccgtggagaaaaacggagggtgcatgcacat
gaagtgcccgcagccccagtgccggctggactggtgctggcactgcggctgcgagtggag
ccgcacctgcatggccgaccactggttcgacgtgtagctgccgcggggcgcgccgccatc
gggcccggagcaccgcggcctgcccgcatcggcgactctccctctctgcacacatgcaca
cgcgcacacacgggctcatgcaaccagatacaccgccacacacacatgcacatacatcta
cacatgcacgcacacaccacacatgtaccccccacgctcatgcacatgtgcatgcacaag
tgcacacacataatacatgcactcatgcacacgcccacacatgcacatgtgtgtgcccac
atgcgcacgcacgcatatacattatactcgcgtgcacaggagcgtgtgagcacacgtgtg
tgcacacacacgtgtgcccacaggcacccagttctttccgcaatcacagaagcagcccgg
gagcggcctggccccccttcagcgtccccgtggaaaccaccctgtgggcactga
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integrated database retrieval system
