Phyllostomus hastatus (greater spear-nosed bat): 123822936
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Entry
123822936 CDS
T07912
Symbol
SYMPK
Name
(RefSeq) symplekin isoform X1
KO
K06100
symplekin
Organism
phas
Phyllostomus hastatus (greater spear-nosed bat)
Pathway
phas03015
mRNA surveillance pathway
phas04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
phas00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123822936 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
123822936 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phas03021
]
123822936 (SYMPK)
03019 Messenger RNA biogenesis [BR:
phas03019
]
123822936 (SYMPK)
Transcription machinery [BR:
phas03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123822936 (SYMPK)
Messenger RNA biogenesis [BR:
phas03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
123822936 (SYMPK)
U7-dependent histone pre-mRNA processing factors
123822936 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
123822936
NCBI-ProteinID:
XP_045701071
LinkDB
All DBs
Position
Unknown
AA seq
1282 aa
AA seq
DB search
MAGSSGDSVTRRSVASQFFTQEEGLGIDVMTTSERVVDLLNQAALITSDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQVDKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKRAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILMLDSDNDGVR
THAIKFVEAFIVTLSPRMADSEVPRRHEQDISLDRVPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPNSKDARKRPRDDSDSSLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPETMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQSKEEPKEEK
VAKPESVLIKRRLSAQGQAISVVGSLSAMSTLEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQQARVKILASLVTQFDSG
LKAEVLAFILEDVRARLDLAFAWLYQEYNAYLAAGASGTLDKYEDCLIRLLSGLQEKPDQ
KDGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLD
LSSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVA
APWTDETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSP
ELLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLE
KKEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSSKCDM
KSIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNI
LSRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHV
RSFTPHQQAHIPNSIMTILEASGKQEPEAKEPPAGPLEEDDLEPLALAPAPAPRPPQDLI
GLRLAQEKALKRQLEEEQKLKPGGVAAPPSSSSSSSSARPGPPQGAPQPEEAMDFREEGP
ECETPAIFISMDDDSGLTEAALLDSSLEGPLPKEAAVGGLTSKEERSPQTLTPAGEDTAK
TPSPAATSAAEETGEPETKGNS
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcagcagtggggacagtgtcactcgccggagtgtggcgtcacagtttttcacg
caagaggaggggctgggcatcgatgtcatgaccacctcggagagagtggtggacctcttg
aaccaggccgcgctgatcaccagcgactcgaagatcacagtgctcaaacaggtccaggaa
ctgatcatcaacaaagatcccacactgttggacaacttcctggatgagatcatcgccttc
caagtggataagtcgattgaagtgcgcaaatttgtcatcggcttcatcgaggaggcatgc
aagcgagacattgagttattgctgaaactgattgcgaacctcaacatgctcctgagggac
gagaacgtgaacgtggtgaagagggccatcctcaccatgacccagctctacaaggtggcc
ctgcagtggatggtgaagtcgcgcgtcatcagcgagctgcaggaggcctgctgggacatg
gtgtctgccatggccggggacatcattctgatgctggactcggacaatgatggtgtgcgc
acccacgccatcaagtttgtggaggccttcattgtcaccctgtcgccccgcatggctgac
tcggaggtgccccggcgccacgagcaggacatcagcctggaccgtgtcccccgtgaccac
ccctacatccagtacaatgtgctgtgggaggagggcaaggcagccttggagcagctcctc
aagttcatggtacaccccgccatctcgtccatcaacctgaccacggcgctgggctccctg
gccaacatcgcccgccagaggcccatgttcatgtctgaggtgattcaggcctacgaaacc
ctgcacgccaacttgcccccaacgctggccaagtctcaggtgagcagcgttcgcaagaac
ctcaagttgcacctgttgagtgtgctgaagcacccggcctccctggagttccaggcccag
atcaccacgctgctggtggacctgggcacgccgcaggccgagatagcccgcaacatgccc
aacagcaaggacgcccgcaagcggccccgggacgactcggactcctctctcaagaagatg
aagctggagcccaacctgggggaagatgatgaggacaaggacttggagccaggcccatcg
gggacctcgaaggcctctgcccagatctcaggccagtcggacacggacatcacagccgag
ttcctgcagcctctgctgacgcctgacaacgtggccaatctggtcctcatcagcatggtg
tacctgccggagaccatgcctgcctccttccaagctatctacaccccggtggagtccgcg
ggcaccgaagcccagatcaagcacctggcccggctcatggccacacagatgacggccgcg
ggactggggcccggtgtggagcagaccaagcagtccaaggaggagcccaaggaggagaag
gtggcgaagcccgagagcgtcctgatcaagcgacggctgtcagcgcagggccaggccatc
tcggtggtgggctccctgagcgccatgtccacgctggaggaggaggcgccccaggccaag
agacggcctgagcccatcatccctgtcacgcagccccggctggcgggtgccggcgggcgc
aagaaaatcttccgtctgagcgatgtcctgaagcccctgacggacgcgcaggtggaggcc
atgaagctgggcgctgtgaagcggatcctgcgggcggagaaggctgtggcctgcagcggg
gcggcccagcaggcacgcgtcaagatcctggccagcctggtgacacagtttgactcgggc
ctgaaggccgaggtcctggccttcatcctggaggatgtgcgggcccgcctggacctggcc
ttcgcctggctctaccaggagtacaacgcctacctggcggccggggcctcgggcaccctg
gacaagtacgaggactgcctcatccgcctgctctctggcctgcaggagaagcccgaccag
aaggatgggatcttcactaaggtggtgttggaggcgccactcatcacggagagcgccctg
gaggtgattcgcaagtactgcgaggacgagagtcgcacctacctgggcatgtccactctc
cgagacctcatcttcaagcgcccgtcccgccagttccagtacctgcatgtcctgctggac
ctcagctcccacgagaaggacaaggtgcgctcgcaggccctgctgttcatcaagcgcatg
tatgagaaggagcagctgcgcgagtacgtggagaagtttgccctgaactacctgcagctg
ctggtccaccccaacccgccgtccgtgctgtttggggccgacaaggacacagaggtggcc
gcgccctggactgacgagacggtgaagcagtgtctgtacctctacctggccctcctgcct
cagaaccacaagctgatccacgagctggcagccgtgtacactgaggccatcgctgacatc
aagcggacggtgctgagggtcatcgaacagccgatccgaggaatgggcatgaactctcca
gagctgctgctcctggtggaaaactgtcccaagggggcagagacactggtcacgagatgc
ctgcacagcctcacagataaagtcccaccctccccggagctggtgaagcgggtccgagac
ctgtaccacaagcggctgccggacgtccgcttcctcattcccgtgctcaacgggctggag
aagaaagaagtgatccaggccctgcccaagctcatcaaactcaaccccattgtggtgaaa
gaggttttcaaccgcctgctgggcacccagcacggtgaagggaactcggccctgtccccc
ctgaaccctggagagctgctgattgcattacacaacatcgactcatcgaagtgtgacatg
aagtccatcatcaaagccaccaacctatgctttgcggagcggaacgtgtacacgtcggag
gtgctggccgtggtgatgcagcagctgatggagcagagccccctgcccatgctgctcatg
aggaccgtcatccagtccctgaccatgtacccccgcctggggggcttcgtcatgaacatc
ctgtcccgactcatcatgaagcaggtgtggaagtaccccaaggtgtgggagggcttcatc
aagtgctgccaacgcaccaagccccagagcttccaggtcatcctgcagctgccgccccag
cagctgggtgctgtctttgacaagtgcccagagctccgggagcccctgctggcccatgtc
cgctccttcaccccccatcagcaagcacacatccccaactccatcatgaccatcctggag
gcgagcggcaagcaggagccagaggccaaggagcctcctgcagggcccctggaagaggat
gacctggagcccctggcgctggccccggcccctgctccccggccccctcaggacctcatt
ggcctgcggctggcccaggagaaggccttgaagcggcagctggaggaggaacagaagttg
aagcctgggggcgtggcagcccctccctcctcgtcctcgtcctcgtcctctgccaggcca
ggccccccgcagggcgccccccagccggaagaagccatggatttccgggaggaggggcct
gagtgtgagacccccgccatcttcatcagcatggatgatgactcggggctgaccgaggcc
gctctgctggactcgagtcttgaggggcccctaccgaaggaggcagcagtgggcgggttg
acgtcgaaggaggagaggagcccccagaccctcacccctgctggagaagacaccgcgaag
actcccagccccgctgccacctccgccgcggaggaaaccggggaacccgaaaccaagggg
aacagctga
DBGET
integrated database retrieval system
