Phyllostomus hastatus (greater spear-nosed bat): 123828207
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Entry
123828207 CDS
T07912
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
phas
Phyllostomus hastatus (greater spear-nosed bat)
Pathway
phas03018
RNA degradation
phas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123828207 (LSM4)
09123 Folding, sorting and degradation
03018 RNA degradation
123828207 (LSM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phas03019
]
123828207 (LSM4)
03041 Spliceosome [BR:
phas03041
]
123828207 (LSM4)
Messenger RNA biogenesis [BR:
phas03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123828207 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
123828207 (LSM4)
Spliceosome [BR:
phas03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
123828207 (LSM4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
123828207
NCBI-ProteinID:
XP_045708875
LinkDB
All DBs
Position
Unknown
AA seq
139 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGRGMGGAGRGVFGGRGRGGI
PGTGRGQPEKKPGRQTGKQ
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgcttccattgtcactgctgaagacggctcagaatcaccccatgttggtagagcttaaa
aatggtgagacatacaacgggcaccttgtcagctgtgacaactggatgaacatcaacctg
cgcgaggtgatctgcacgtccagggatggagacaagttctggcggatgccagagtgctac
atccgaggcagcaccatcaagtatctgcgcatccctgacgagatcattgacatggtcaag
gaagaggtggtggccaaaggtcgtggtcgcggtggtctgcagcagcagaagcagcagaaa
ggccgtggcatggggggtgccgggcgaggtgtgtttggcggccggggccgaggcgggatc
ccaggcactggcagaggtcagccggaaaagaagcccggtaggcagacgggcaaacagtga
DBGET
integrated database retrieval system
