Phyllostomus hastatus (greater spear-nosed bat): 123828737
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Entry
123828737 CDS
T07912
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
phas
Phyllostomus hastatus (greater spear-nosed bat)
Brite
KEGG Orthology (KO) [BR:
phas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phas03009
]
123828737 (PDCD11)
Ribosome biogenesis [BR:
phas03009
]
Eukaryotic type
90S particles
Other 90S particles
123828737 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_PDCD11
HAT_Syf1_CNRKL1_N
OB_RRP5_4th
HAT_PRP39_N
Spt6_S1
HAT_PRP39_C
OB_RRP5
HAT_Syf1_CNRKL1_C
Suf
TPR_14
CFAP70_mid_TPR
PRP6_TPR
TPR_19
DUF8501
CFAP70_TPR_C
TPR_CcmH_CycH
ARM_TT21
UTP6_C
TPR_16
ARM_TT21_5th
TPR_15
TPR_YpiA_C
DUF7017
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
123828737
NCBI-ProteinID:
XP_045709888
LinkDB
All DBs
Position
Unknown
AA seq
1876 aa
AA seq
DB search
MASMEESFPRGGTRKTHKSEKAFEHSVEQDNLFDISAEEESTKRKKSQTGPAKSKKLKIE
KRESSKSVKEKFEILSIESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICDAYT
KKLNEQVAQEEPLKDLASLPELFSPGMLVRCVVSSLGITEKGKKSVKLSLNPKNVNKVLS
AEALKPGMLLTGTVSSREDHGYLVDVGVAGARAFLPLQKAQDYVRQKNKGAELKVGQYLN
CVIEEVRGNGGVVRLSVGHSEVSAAFATEEQNWTLNNLLPGLVVKGQVEKVMPLGLTLNF
LSFFTGLVDFMHLDPKKAGTYSPNQAVRACVLCVHPRTRAVRLSLRPIFLQPGRPLTRLS
CQHLGAVLDDIPVQGFFSKAGATFRLKDGSLAYARLSHLSDSKSAFSPEAFKPGNTHKCR
IINYSQMDELALLSLRTSVIEAQYLSFHDIKPGALVKGTVLTIKPYGMLVKVSEQIRGLV
PPVHLADIPMKNPEKKYRVGDEVTCRVLLCDPEAKKLMMTLKKTLVESKLPAITCYADAK
PGLQTHGFILRVKDYGCIVKFYNDVQGLVPKHELSAEYVPDPERVFYAGQVVKVAVLNCE
PSKERMLLSFKLLSDPKKEHAGRGQKKGKTVNVGQLVDVKVLEKTKDGLEVAVLPHNIPA
FLPTSHLSDHVANGPLLYHWLQAGDTLHRVLCLSQSEGHVLLCRKPALVSTVEGGQDPKS
FSEIHPGMLLMGFVRSIKDYGVFVQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVVAK
VTNVDEEKQRMLLSLRLSDCSLGDRATTSLLLLSQCLEERQGVRSLMSNRDSVLIQTLAE
MIPGMVLDLEVQEVLEDGSVVFSEGPVPGLVLRASKYHRAGQEVEAGQKKKAVILHVDMV
KLEVHVSLCHDLVNRKAKKLKKGSEHQAVVQYLEESFAIASLVETGDLAAFSLTTHLNDT
FRFDSEKLQVGQGVSLTIKTTEPGVTGLLLAVEGPAAKRTMRQTRKDSETVDEDDEGDPA
LVAGTKKEHALSIGDMVTGTIKSIKPTHVVVTLENGTIGCIHASHILDDVPVGTSPTAKL
KVGKKVTARVIGGRDMKTFKFLPISHPRFIRTIPELSVRPSELAKDGHTALNTHSVSPSE
KIKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFRIGQ
ALKATVVGPDSSKAFLCLSLIGPHKLEEGEVAMGRVVKVTPHKGLTVSFPFGRMGSVGLF
HVSDSYSETPLEDFTPQKIVRCYVLSAADEVLTLSLRSSRTNPETKSKITDPEINSIRDV
QEGQLLRGYVQSVQPHGVLLGLGPSVVGVARYPHVSQCSPSQKALCDRHLPEGKLLTAKV
LSVNQQKNLVELSFLPSHTGKPDVFPAPPGQPLPEQGERQGEAEERDHRGEGGKERKRKN
QERKEKRERKQQEEVRMPSKEKKEPHQPQVKKQGKRPRLEPRSEQEGVSKKQKKGAPSEE
DDSGVEVYYREGEEEIEERSVLPKEKQTRPAELPRLQLSSGFVWDVGLDSLTPALPPQGE
SSDSEEDEKPQQATKKKSKKERELEKQKAEKELSRIEEALMDPGQQPESADDFDRLVLSS
PNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQE
SLTKVFERAVQYNEPLKVFLQLADIYTKSQKFQEAGELYNRMLKRFRQEKAVWIKYGAFL
LRRGQAGASHRAMQRALECLPKKEHVDVISKFAQLEFQLGDAERAKAIFENTLSTYPKRT
DVWSVYIDMTIKHGSQKEVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVK
AKALDYVEAKSSVLED
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atggcatccatggaagaaagcttcccccgtgggggcacaagaaagacccacaaatcagag
aaagcttttgagcattcagttgaacaagacaatttatttgatatttctgctgaagaggaa
tccaccaaaaggaaaaagagccagacaggtccagcaaagtcaaaaaagttgaaaatcgaa
aagagggaaagcagcaagtctgtaaaagaaaagtttgaaatccttagtattgagtccctg
tgtgagggaatgcggattttgggttgtgtgaaagaggtaaatgaactggaactggtgatt
agtctccccaatggcctccaggggtttgtgcaagtaactgaaatctgtgatgcttacacc
aaaaagctcaatgagcaggtggcgcaagaagaacctctgaaggacctggctagcttacct
gagctcttctctcctgggatgctggtgagatgtgtggtgagcagtctgggcatcacagag
aaaggcaaaaagagtgtgaagctatctctgaaccccaaaaatgtcaacaaagtgctgagc
gcagaagccctgaagcccggcatgctgctcacaggcactgtgtccagtcgggaagaccat
ggctacctagtggacgttggtgttgctggggccagagctttcctgccactgcagaaagcc
caggattatgtcagacagaagaacaaaggcgccgagctgaaggtgggtcagtacctgaac
tgcgtcattgaagaggtgagaggcaacggaggagttgttcgtctgtctgtcggtcattct
gaagtttctgctgcctttgctactgaggagcaaaactggacccttaataacttgctaccc
ggactggtagtcaaaggccaggtagagaaggtgatgccactgggccttacactaaacttc
ctctcattcttcactggcctggttgacttcatgcacttggatcccaagaaagctggaaca
tactccccaaatcaagcagtgagggcctgtgtcctctgtgtccatcctcggaccagggct
gtgcggctgagcctgcgccccatcttcctgcagcctgggcgcccactcacccgcctgtct
tgtcagcacctgggagctgtcctggatgacattcctgtccagggctttttcagcaaggcc
ggggccactttcagactgaaggatgggtctctggcctatgctcggctcagccacctctct
gattctaagagtgccttcagtcctgaggccttcaagccaggaaacactcacaagtgtaga
atcatcaactacagccaaatggacgaactggctttgctctcgctgcgcacgtctgttatt
gaagcccagtacctgagctttcatgacatcaagcctggggcactggtaaagggcacagtg
ctgaccataaagccatacgggatgttggtgaaagtgagtgagcaaatcaggggcctggtg
cctcctgtgcacctggctgacatcccgatgaagaatccagagaagaagtaccgcgttggg
gacgaagtcacatgccgggttttgctttgtgaccctgaagccaaaaagctgatgatgact
ctgaagaaaaccctggttgagtccaaacttcctgccatcacctgctatgccgacgccaag
cctggtctgcagacacatggcttcatcctcagggtcaaggactatggctgcattgtgaag
ttctacaacgatgtgcagggactggtacccaagcacgagctcagtgccgagtatgtccca
gacccagagagggtcttttatgccggccaggtggtgaaggttgcggtgctgaactgtgag
ccgtccaaagagaggatgcttttgtccttcaagctattgagtgatccaaagaaagagcat
gcggggcgtggccagaagaaaggaaaaaccgttaatgttggtcagttggtggatgtgaag
gttttagagaagaccaaagacggcctggaggtggccgtcctgccccacaacatccctgct
ttcctccccacgtctcacctgtcggaccacgtcgccaacggcccactgctgtatcactgg
ctccaggccggtgacacccttcacagagtgctgtgtctgagccagagtgagggccacgtc
ctcctttgtaggaagccagcgctggtctccacagtagaggggggccaggatcccaagagc
ttctcagaaatccaccctggaatgctgctcatgggttttgtgaggagcatcaaggactac
ggtgtgttcgtccagttcccttcaggtctcagcggactggcccccaaagctatcatgagt
gacaaatttgtgacctccacaagtgaccactttgtcgaggggcagacggtggtggcgaag
gtgaccaacgtggatgaggagaagcagcggatgctgctgtctctgcggctgtcggactgc
agtctgggggaccgggccaccaccagcctcctcctcctgagccagtgcctggaggagcgg
cagggcgtgcgcagtctcatgagcaaccgagactctgtgttgatccagacgctggccgag
atgatcccagggatggtccttgacctggaggtgcaggaggtgttagaagatggttctgtg
gtgttcagcgagggcccggtgcctggcctggttctgagagccagcaaataccaccgggca
gggcaggaggtggaagctgggcagaaaaagaaggccgtgatcctgcacgttgacatggtg
aagttggaagtgcatgtttccctttgccacgatttggtgaatagaaaagctaaaaagttg
aagaaaggcagtgagcaccaggcggtggtgcagtatttggaggagtccttcgccattgct
tccctggtagagactggcgacctggcagctttctccctgaccactcatctcaacgacacc
ttccgctttgactcggagaagttgcaggtgggacagggtgtctccctaaccatcaagacc
acggaaccgggagtgactggtcttcttctggccgttgaggggccagctgctaagaggacc
atgaggcagacccggaaggactctgagacagtcgacgaggatgatgaaggggatccggct
ctggtcgcagggactaaaaaggagcatgccctctccattggggacatggtcacagggacc
atcaagtccattaagcccacccatgtggttgtgaccctggaaaacggcaccattggctgc
atccatgcctcccacattctagatgatgttccagtgggcacctctcctactgccaagctg
aaagtcgggaagaaggtcactgcccgagtgattggcgggcgagacatgaagacattcaag
tttctcccgataagtcaccccagattcatccgaaccatcccggagctgagcgttcggccg
agcgagctggcgaaggatggccacactgctctcaacactcactccgtcagcccttcggag
aagattaagcagtaccaggctggccagactgtgacttgcttcttgaagaagtacaacgta
gttaagaaatggctggaggtggagatagctccagacatccggggaagaattcccttgttg
ctcacttctcttagcttcaaggttctgaaacatcctgataagaagtttcggattggccag
gccctgaaggccaccgtggttggcccagattcctccaaggccttcttgtgtctctcgctc
ataggtcctcacaagcttgaagagggggaggtggccatgggccgagtggtgaaggtgact
ccccacaaggggctgaccgtctccttcccctttgggaggatgggcagcgtcggtctgttt
cacgtgagcgactcctactcggagacacccctggaggacttcaccccgcagaagattgtc
aggtgttacgtcctgtcggctgcagatgaagtattgactttgtcgctgcgatcgtccagg
acaaacccagagacaaaaagtaaaataactgaccccgagatcaactccattcgggacgtt
caggaggggcagctcctgaggggctacgtgcagtccgtccagccgcacggtgtgctcctt
ggcctcggcccctcagttgtgggtgtggcccggtacccacatgtctcccagtgcagcccg
tcccagaaagccctttgcgacagacaccttcccgaagggaagctgctcacagccaaggtc
ctaagcgtgaaccagcagaagaacctggtggagctgtcgttcctccccagccacacgggg
aagccggacgtgtttcccgcccccccaggacagccactgccagagcaaggggagaggcaa
ggagaggcagaggagagagatcacagaggggagggtgggaaggagaggaagaggaagaac
caggaaaggaaagagaagagggagcggaagcagcaggaggaggtgcggatgcctagcaaa
gagaagaaagagcctcatcagccacaggtgaagaagcagggcaagcggccgcgcctggag
cccagaagcgagcaggagggggtaagcaagaagcagaagaaaggcgctccatcggaggag
gacgacagtggtgtggaagtgtattaccgggaaggagaagaggagattgaagagaggagt
gtgctgcccaaggagaagcagaccagacccgcagaattgccccggctgcagctgtcttcc
ggcttcgtgtgggacgtggggctggactctctgaccccggccttgccgcctcaaggagag
agctcagacagcgaggaggacgagaagccacagcaagccacgaagaaaaaaagcaagaag
gaaagggagttggagaagcagaaggcagagaaagagctgtcccgcattgaggaggcgctg
atggatcctgggcagcagccagagtcagcagatgattttgatcgactggtgctgagctcc
cccaacagctccatcctgtggctgcagtacatggccttccacctgcaggccacggagatc
gagaaggcccgggccgtggctgagagggctctcaagaccatctccttcagagaggaacag
gagaagctgaatgtgtgggtggccctgctgaacctagaaaacatgtacggctctcaggag
tcgctgaccaaggtcttcgagcgggctgtgcaatacaacgagcctctcaaggtctttctc
cagctggccgacatctacaccaagtcacagaaattccaggaagctggggagctctacaac
cggatgctgaagcgtttccggcaggagaaagctgtctggatcaaatacggtgccttcctt
ctgcggaggggccaggccggggccagtcaccgggcgatgcagcgagcccttgagtgcctg
cctaaaaaagagcacgtggacgtgatctccaagttcgcccagcttgagttccagctgggc
gatgcggagcgggccaaagccattttcgagaacacactgagcacctacccgaagcgcaca
gatgtctggtcggtctacatcgacatgaccatcaagcacggcagccagaaggaagtccgg
gacatcttcgagcgggtcattcacctgagtctggcccctaagcggatgaaattcttcttc
aagcgctacctggactacgagaagcagcatggcaccgagaaggatgtgcaggcagtgaag
gccaaggccctggactacgtggaggccaagagctccgtgctggaggactag
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integrated database retrieval system
