Phyllostomus hastatus (greater spear-nosed bat): 123829482
Help
Entry
123829482 CDS
T07912
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
phas
Phyllostomus hastatus (greater spear-nosed bat)
Pathway
phas03008
Ribosome biogenesis in eukaryotes
phas03013
Nucleocytoplasmic transport
phas03015
mRNA surveillance pathway
phas05014
Amyotrophic lateral sclerosis
phas05164
Influenza A
phas05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
phas00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123829482 (NXF1)
03015 mRNA surveillance pathway
123829482 (NXF1)
03008 Ribosome biogenesis in eukaryotes
123829482 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
123829482 (NXF1)
05168 Herpes simplex virus 1 infection
123829482 (NXF1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
123829482 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phas03019
]
123829482 (NXF1)
03009 Ribosome biogenesis [BR:
phas03009
]
123829482 (NXF1)
Messenger RNA biogenesis [BR:
phas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123829482 (NXF1)
mRNA cycle factors
Stress granule specific factors
123829482 (NXF1)
Ribosome biogenesis [BR:
phas03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
123829482 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
UBA_8
LRR_4
LRR_9
LRR_8
Motif
Other DBs
NCBI-GeneID:
123829482
NCBI-ProteinID:
XP_045711212
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MADGGKSYSEHDDRVSFPQRRKKGRGPFRWRGGGEGSRRSGRGGGTGIRSSRLEEDDRDV
AMSDAQDVPRVRYNPYSARPNRRDAWHERDRIHVTVRRDRAPAQRVGAGTGQDGTSKNWF
KITIPYGRKYDKAWLLSMIQSKCSVPFTPIEFHYENTRAQFFVEDSSTASALKAVNYKIL
DQENRRISIIINPSPPPQTILNELKPEQVEQLKLTMSKRFDSSQQALDLKGLRSDTDLVA
QNIDVVLNRRSCMAATLRIIGENIPELLSLNLSNNKLYRLDDMSSIVQKAPKLKILNLCG
NELKSERELDKVKGLKLEELWLLGNPLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPI
AFDVDAPTILPPCKGSYFGTEALKSLVLHFLQQYYAIYDSGNRQRLLDAYHDGACCSLSI
PFTPQNPSRSNLGEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDINSFV
VDISAQTNTLLCFSVNGVFKEVDGKSRDSLRAFTRTFVAVPASSSGLCIVNDELFVRNAS
PDEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSA
QVFTHLKAKGEIPEVAFMK
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggggggaagtcctacagcgagcacgatgaccgcgttagtttccctcaaaga
agaaagaaaggccggggtcctttccggtggaggggtggcggcgaggggagccgcaggtct
ggaaggggaggaggcactggcattcggtcttcccgcctcgaggaggacgacagagatgtg
gcaatgagcgatgcccaggatgttccccgcgtaagatacaacccctattctgcacgaccc
aaccgtcgcgatgcttggcatgagcgagaccgcattcacgttaccgtgcggagggacagg
gctcctgcgcagagagtaggggctggcaccggccaggatgggacctcgaagaactggttt
aagattacaattccttatggcaggaaatatgacaaggcatggctcctgagtatgattcag
agcaaatgcagtgtcccctttacccccattgagtttcactatgaaaacacacgggcccag
ttttttgttgaggattccagtaccgcctctgcactgaaggctgtcaactataagatcttg
gatcaggagaaccgaaggatatccatcatcatcaacccctcgcctccgccccaaacgata
ctgaacgaactgaagccagagcaagtggagcagctaaagctgaccatgagcaaacgattc
gatagctcccagcaagcactcgacctcaagggcctccgttcagacacagacttggtggcc
cagaacattgatgtcgtcctgaaccgtagaagctgtatggcggctacgttacgaatcatt
ggggaaaacatccctgagttactgtccttgaacttgagcaataataagctatataggctg
gatgacatgtccagcattgtgcagaaagcacccaaactgaagatcctaaacctctgtggc
aacgagttgaaatctgagcgggagttggacaaggtaaaagggctgaagctagaagaactg
tggctcttaggaaaccccttgtgtgacaccttccgcgatcagtccacctacatcagcgcc
attcgtgaacgattccccaagttactacgcctggacggccatgagttacccccaccaatc
gcctttgatgttgacgcccccacgatattaccgccctgcaagggaagctatttcggtaca
gaagccctgaagagtctggtcctgcacttcttgcagcagtactacgcaatttatgactcc
ggaaaccggcagcggctcctggatgcctaccacgatggagcctgctgctccctgagcatc
cccttcaccccccagaacccttcccgaagtaacttgggcgagtacttcaaggatagcaga
aatgtgaagaaactgaaagacccgacgctgcggttccggctgctgaagcacacgcggctc
aacgttgtggccttcctcaatgagttgcccaaaactcagcacgacatcaattcctttgtg
gtagacatcagcgcccagaccaacacattgctgtgtttttctgtcaatggagtcttcaaa
gaagtggacgggaagtctcgggactctctgcgagccttcacgcggacgtttgtcgctgtt
ccagccagcagttcagggctgtgcattgtgaacgatgagctgttcgtgcggaacgccagc
cccgatgagatccagagagctttcgccatgcccgcacccacgccctcctccagcccggtg
cccaccctctccccggagcagcaggagatgctgcaggcattctccacgcagtccggcatg
aacctcgagtggtcccagaagtgccttcaggacaacaactgggactacaccagatctgcc
caggtcttcactcatctcaaggccaagggtgaaattccagaagtggcgttcatgaagtga
DBGET
integrated database retrieval system
