Phyllostomus hastatus (greater spear-nosed bat): 123829890
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Entry
123829890 CDS
T07912
Name
(RefSeq) LOW QUALITY PROTEIN: polyadenylate-binding protein 1-like
KO
K13126
polyadenylate-binding protein
Organism
phas
Phyllostomus hastatus (greater spear-nosed bat)
Pathway
phas03015
mRNA surveillance pathway
phas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phas00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123829890
09123 Folding, sorting and degradation
03018 RNA degradation
123829890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phas03019
]
123829890
03041 Spliceosome [BR:
phas03041
]
123829890
Messenger RNA biogenesis [BR:
phas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123829890
mRNA cycle factors
Stress granule specific factors
123829890
Spliceosome [BR:
phas03041
]
Complex C
Other components
Complex C specific factors
123829890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_Nup35
RRM_occluded
RRM_3
RBD_RDR6
bZIP_1
POP1_C
Motif
Other DBs
NCBI-GeneID:
123829890
NCBI-ProteinID:
XP_045711786
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MSACTSSHSSTSLYVGDLHPEVTEAVLYSKFSPAGPILSIRVCRDAITGHSLGYGYVNFC
RPEDAKCALNTMNFDIINGNPIRIMWCQRDPSLRKSGVGNIFVNHLDKSIDHKVLYDMFS
DFGNILSCKVICDENGSKGHGFVHFETQEAAQKAIETMNGKLIHDRKIYVGQYKSPNQRE
VERRDRAKEFTNVYIKNFGESVNDERLEDVFGKFGPILSVKVMTDESGKSKGFGFVRFQC
HEDAQKAVDEMDGKELDNTTIYVSRAQRKKERQKELQQKFDEIKQNRHNQDHSVNLYVKN
LADDIDDERLFKEFSSFGTVIRAKVMMKDGQPKGFGFVCFSSREEATKAVAEMNGKILST
KPLYVCFAQYREERQAHLATYYMQRMPTLTAMPNPAINPYQTAPPGSLMPAVPQTADWAA
YSPLGQATQLTSSLHCVDQGARPHPFQNMPNAIGPATPNPPFSTMRPASSQLPQVISTEP
QCVANTSTATVGSPPATAATSATTAVRTILRYEYTEGVCNPRQLNTQPQATIKQPAVRVQ
NETSLIASRLASAPPQQQKQILGKWLFPLIQAMQPTLANKITGMVLEMDNSELLHMLESP
ESLRSKVDEAVAVLEACQAQGAXQKAINNATMVPILKLTIDHREKLIDDS
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcctgcacatccagccactcctcgacctcgctgtacgtaggagacctacacccg
gaggtgactgaggcagtgctctacagcaagtttagcccagcagggcccatcctctccatc
cgggtctgcagagatgcgatcaccggccactccttgggctacgggtatgtgaacttttgt
cgaccagaggacgcgaagtgtgctttgaacacaatgaattttgatattataaatggcaac
ccaattcgcatcatgtggtgtcaacgtgacccatcacttcgcaaaagtggtgtgggcaac
atattcgttaatcatttagacaaatccattgatcataaagtactgtatgatatgttttct
gattttggtaacatcctttcctgtaaggtgatttgtgatgaaaatggttccaagggtcat
ggatttgtacattttgagacacaggaagcagctcaaaaagctattgaaaccatgaatggc
aagcttatacatgatcgcaaaatatatgttgggcaatataagtctcctaaccaacgagag
gtagagcgcagagatagggcaaaagagttcaccaacgtttacatcaaaaattttggggag
agtgtaaacgatgagcgccttgaggatgtctttggcaagtttggacctatcttaagtgtc
aaagtaatgactgatgaaagtgggaaatccaaaggttttggatttgtaaggttccaatgc
catgaagatgcacagaaagctgtggatgagatggatggaaaagagcttgataatacaaca
atttatgtttcccgagctcagagaaaaaaggaaaggcagaaagaacttcaacagaaattc
gatgagattaagcaaaataggcacaaccaagaccacagtgttaacctttatgtgaaaaat
cttgctgatgatattgatgatgaacgtctctttaaagagttctcttcatttggtacagtc
attagagcaaaggttatgatgaaggacggtcaaccaaaaggttttggttttgtatgtttc
tcttcccgagaagaagccactaaagcagtagcagaaatgaatggtaaaattttgtccacc
aagccattgtatgtatgttttgctcagtacagagaagaacgccaagctcacctcgctacc
tactacatgcagagaatgccaactttgacagctatgcccaacccagcaatcaacccctac
cagacagcacctccaggttccttgatgccagctgtcccacagacagcagactgggctgca
tactctcctcttggccaagctactcaactaacatcaagtcttcactgcgtcgatcagggt
gccagacctcatccattccaaaatatgcccaatgctattggcccagccactcctaatcca
ccattcagtaccatgagaccagcttcttcacagcttccacaagtcatctcaacggagcca
cagtgtgttgctaacacatcaacagcaacagtaggttcacctcctgcaactgctgccact
tcagctactactgctgtccgcaccattctacggtatgaatatactgaaggagtctgcaat
cctcgacaacttaatacacagccacaagctaccattaagcagcctgctgttcgtgtacaa
aatgagacatctttgattgcttccaggctggcatctgcccctcctcaacagcaaaagcaa
attttgggcaaatggttgtttcctctaattcaagccatgcaacctactcttgctaataaa
attactggcatggtcttggagatggataattcagaacttcttcatatgcttgagtctcca
gagtctctccgttctaaagttgatgaagctgtagctgtactagaagcctgccaggctcaa
ggggctnatcagaaagccattaacaatgccacaatggttccaattttaaaattgactatt
gaccacagggagaaactcatcgatgactcttag
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