KEGG   Phyllostomus hastatus (greater spear-nosed bat): 123830255
Entry
123830255         CDS       T07912                                 
Symbol
LIG1
Name
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
phas  Phyllostomus hastatus (greater spear-nosed bat)
Pathway
phas03030  DNA replication
phas03410  Base excision repair
phas03420  Nucleotide excision repair
phas03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:phas00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    123830255 (LIG1)
   03410 Base excision repair
    123830255 (LIG1)
   03420 Nucleotide excision repair
    123830255 (LIG1)
   03430 Mismatch repair
    123830255 (LIG1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:phas03032]
    123830255 (LIG1)
   03400 DNA repair and recombination proteins [BR:phas03400]
    123830255 (LIG1)
Enzymes [BR:phas01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     123830255 (LIG1)
    6.5.1.6  DNA ligase (ATP or NAD+)
     123830255 (LIG1)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     123830255 (LIG1)
DNA replication proteins [BR:phas03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    123830255 (LIG1)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     123830255 (LIG1)
DNA repair and recombination proteins [BR:phas03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     123830255 (LIG1)
   NER (nucleotide excision repair)
    Other NER factors
     123830255 (LIG1)
   MMR (mismatch excision repair)
    Other MMR factors
     123830255 (LIG1)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase DDR PucR
Other DBs
NCBI-GeneID: 123830255
NCBI-ProteinID: XP_045712251
LinkDB
Position
Unknown
AA seq 883 aa
MQRSIMSFFQPKKEGKAKKPEEASDSIRETEPPPKVALKERNRVVPESESPVKRPGRRAA
QVLCSDGEEEDEAITPPKGQKPAPDSPPASPPSPVTVPESSPSLSGTSLARISPSGIPKR
RTARKQLSKRTIQDVLDEHNRDKDRETKRKREEEDAEAPQESSSEPEAREEDLAKPPPRA
PKTLSSFFTPRKPAIKKEVKEAGPGTPRKEEPKGLSHSDESSSPLDPGSYNPAKNSYHPV
HDACWKQGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPILYLSLN
CLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRLMLPP
PALTAAGVFARFRDIARLTGSASTAKKIEIIKGLFVACRHSEARFIARALSGQLRLGLAE
QSVLAALAQAVSLTPPGQEFPPAVVDAGKGKTAEARKSWLEEQGMILKQTFCEVPDLDRI
VPVLLEHGLERLPEHCRLSPGVPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQI
HFLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDAEAVAWDREKKQIQPFQ
VLTTRKRKEVDAAEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGEFVFA
TSLDTKDMDQIAEFLEQSVKDSCEGLMVKTLDVHATYEIAKRSHNWLKLKKDYLNNVGDT
LDLVVIGAYLGRGKRAGRYGGFLLACYDEESEGLHAICKLGTGFSDEELEEHHRSFQALV
LPTPRSYVRADGAVAPDHWLEPRIVWEVKCADLSLSPIYPAARGLVDSEKGISLRFPRFI
RVREDKKPETATTGAQVACLYRKQSQIQNQQGGDADSDQEDFY
NT seq 2652 nt   +upstreamnt  +downstreamnt
atgcagcgaagtatcatgtcatttttccaacccaagaaagagggcaaagcaaagaagcca
gaggaggcatccgacagcatcagagagacagagccccctccaaaggtggcgctgaaggag
cggaacagagtggtgccagagagcgagtccccagtgaagaggccggggaggagggcggcc
caggtcctgtgcagcgacggtgaggaggaggatgaagccatcacaccccccaaaggccag
aagcctgcccctgactccccaccagcctccccacctagtccggtcacggttcccgagagc
agcccttccctgtccggcacatctctggcgcgcatctccccatcgggcatcccgaagcgt
cgcacagctcggaagcagctttctaaacggacgattcaggatgtcctagatgagcacaac
agggacaaggaccgagagaccaagaggaagagggaggaagaagacgcagaggccccgcaa
gagagcagctcggagcctgaggcccgggaagaggacctggcgaagcctccgcccagagct
cccaagacgctcagcagcttcttcaccccccggaagccggcaatcaagaaggaagtaaag
gaagcggggcctggcaccccaagaaaggaggagcccaagggactctcccactcggatgag
agctccagcccgctggacccaggcagctacaaccctgccaagaacagctaccaccctgtg
cacgacgcctgctggaagcagggccagaaggtcccttatctggctgtggcccggacgttc
gagaagattgaggaggtttctgctcggctccggatggtggagacgctgagcaatttgctt
cgctccgtggtggccctgtcacctccagacctcctccccatcctctacctcagtctcaac
tgcctcgggccaccccagcagggcctggagcttggcgtaggggacggtgttcttctcaag
gcggtggcccaggccacaggtcggcagctcgagtctgtccgggctgaggcggccgagaag
ggtgatgtggggctggtggccgagaacagccgcagcacccagaggctcatgctgcccccg
cccgctctcaccgccgctggggtcttcgccaggttccgagacatcgcccggctcactggc
agtgcttccacggccaagaagatagagatcatcaaaggcctcttcgtggcctgccgccac
tcagaagcccggttcatcgccagagccctgagcggacagctgcgtctcgggctggcggag
cagtcggtgctggctgccctcgcccaggccgtgagcctcacacccccaggccaagaattc
cccccagccgtggtggatgccgggaagggcaagacagcagaggccagaaagtcgtggctg
gaggagcagggcatgatcctgaagcagacgttctgcgaggtgcccgacctggaccgcatc
gtcccggtgctgctggagcacggcctggagcggctgccggagcactgccggctgagtcca
ggggtccccctgaaaccgatgttggcccaccccacccggggcgtcagcgaggtcctgaaa
cgctttgaggaggccgccttcacctgcgagtacaaatacgacgggcagagggcgcagatc
catttcctggagggcggggaggtgaagatcttcagcaggaaccaggaagacaacacggga
aagtaccccgacatcattagccgcatccccaagataaaactcccgtcagtcacatctttc
attctggacgcggaagcggtggcttgggaccgggaaaagaaacagatccagccattccaa
gtgctcaccacccgaaaacgcaaggaggtggacgcggcggagatccaggtgcaggtgtgt
ctgtacgccttcgatctcatctacctcaatggagagtccctggtacgcgagcccctctcc
cgacgccggcagctgctccgggagaacttcgtggagacagagggcgagttcgtcttcgcc
acctccctagacaccaaggacatggaccagatcgctgagttcttggagcagtcagtgaaa
gactcctgcgaggggctgatggtgaagaccctggatgtccacgccacctacgagatcgcc
aagaggtctcacaactggctcaagctgaagaaggactacctgaacaatgtgggcgacacc
ctggatcttgtggtgatcggcgcctacctgggccgggggaagcgggccggccgctacggg
ggcttcctgctggcctgctacgacgaggagagcgaggggctgcacgccatatgcaagctc
ggcactggcttcagcgacgaggagctggaggagcaccaccggagcttccaggccctggtg
ctgcccaccccgcgctcctacgtccgggcagatggcgctgtggcccctgaccactggctg
gagccccgcatcgtgtgggaggtcaagtgtgccgatctctccctctccccgatctaccct
gcggcccgggggctggtggacagtgagaagggcatctccctccgcttccctcggtttatc
cgcgtccgtgaagacaagaagccagagacggccaccaccggtgcccaggtggcctgtctg
tacaggaagcagagtcagatccagaaccagcagggtggggacgcagactccgaccaggag
gacttctactag

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