Phyllostomus hastatus (greater spear-nosed bat): 123830429
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Entry
123830429 CDS
T07912
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
phas
Phyllostomus hastatus (greater spear-nosed bat)
Pathway
phas03082
ATP-dependent chromatin remodeling
phas04714
Thermogenesis
phas05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
phas00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123830429 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
123830429 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
123830429 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phas03021
]
123830429 (SMARCC1)
03036 Chromosome and associated proteins [BR:
phas03036
]
123830429 (SMARCC1)
Transcription machinery [BR:
phas03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123830429 (SMARCC1)
Chromosome and associated proteins [BR:
phas03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123830429 (SMARCC1)
PBAF complex
123830429 (SMARCC1)
GBAF(ncBAF) complex
123830429 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
DUF919
BRCT_2
SpeFL
Motif
Other DBs
NCBI-GeneID:
123830429
NCBI-ProteinID:
XP_045712559
LinkDB
All DBs
Position
Unknown
AA seq
1103 aa
AA seq
DB search
MAAAAGGGGPGTAAGAAGAGGAAVAAGLAVYRRKEGGPASKFWESPETVSQLDSVRVWLG
KHYKKYVHADAPTNKTLAGLVVQLLQFQEDTFGKHVTNPAFTKLPAKCFMDFKAGGTLCH
VLGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLTRPNIYLMPDIDLKL
ANKLKDIVKRHQGTFTDEKSKASHHIYPYPASQEDEEWLRPVMRKDKQVLVHWGFYPDSY
DTWVHSNDVDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDENRKPVSFRQRI
PTKNEEPVRSPERRDRKASASARKRKHSPSPPPPAPAEPRKKSGKKGQASIYGKRRSQKE
EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVTAGG
KEDEDPSKGDQSRPADSGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK
SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD
PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFG
LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH
FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE
EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEK
METDADGPQPEKAESKGDNEPDEGDKAQDCDHEKTSEKEQDSEVSEDTKSEEKETEENKE
LTDPYKERESDVGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV
ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ
QHGQNPPQGHQHSGAPGLAPLGAAGHPGMMPHQQPPPYPLMQHQMPPPHPPQPGQMPGPG
SMMPGQPLPGRMIPTVTANIHPPGSGPPPPGMPPMPGNILGPRVTLTAPNGMYPPPPQQQ
PPPPPADGVPPPPAAGPPASAAP
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcagcgggcggcggcggtcctgggacggcggcgggcgccgcgggtgcggga
ggcgcggcggtggctgcgggcctggccgtttatcggcggaaggaagggggcccggccagc
aagttttgggagagcccggagactgtatcccagctggattcggtgcgggtctggcttggc
aagcactacaagaagtatgtgcacgcggacgcgcccaccaataaaacgctggcggggctg
gtggtgcagcttctccagttccaggaagatacctttgggaagcacgtcaccaacccggcc
ttcaccaaactccctgcaaaatgtttcatggatttcaaagctggaggcaccttgtgtcac
gtccttggggctgcttacaagtataaaaatgaacagggatggcggaggtttgatctgcag
aacccgtcccggatggatcgcaatgttgagatgttcatgaatattgaaaaaacactggtg
cagagcaattgtctgaccagacccaacatctacctcatgccagacatcgacctgaagctg
gccaacaaactgaaggacatcgtcaagcggcatcaggggacgtttacggatgagaagtca
aaggcttcccaccacatttatccgtatcctgcctcacaagaagacgaagagtggctgagg
cccgtgatgcggaaagacaagcaggtgctcgtgcactgggggttctacccggacagctac
gatacttgggtccacagtaatgatgttgatgcggaaattgaagatccaccaattccagaa
aagccgtggaaggttcatgcaaaatggattttggacacggacgttttcaacgagtggatg
aacgaggaggattacgaggtggacgagaacaggaagcccgtgagcttccggcagcgcatt
ccaacgaagaacgaagagccagtcagaagcccggagaggagagacaggaaagcgtcagct
agcgctcggaagaggaaacactcgccatcgcccccaccccccgcccccgcagagccacgg
aagaagagcggcaagaaaggccaagcgagtatttatgggaagcgcagaagccagaaggag
gaagatgagcaagaagatcttaccaaggatatggaagacccgacgccagtacccaacata
gaggaggtggtacttccaaaaaatgtaaatccaaagaaagatagcgaaaatacacctgtt
aaaggaggaactgtggccgatctagatgaacaggacgaagagacagtcaccgcaggagga
aaggaagacgaagaccccagcaaaggcgatcagagccggcccgctgactctggagaggat
aacgtgacggagcagaccaatcacatcatcatccccagctacgcgtcgtggtttgactac
aactgtattcatgtgatcgaacggcgggctcttcccgagttcttcaatgggaaaaacaaa
tccaagactccagagatatacttggcatatcgaaattttatgatcgacacatatcgcctg
aacccccaggaatacctgaccagcaccgcttgccggcggaacctgacgggggacgtgtgc
gcggtgatgagggttcatgcctttttggagcagtgggggcttgttaattaccaagtggac
ccagagagccgacccatggccatgggacctcctcctactccccatttcaacgtgctggct
gacaccccctctggactcgtgccgctgcacctccggtccccgcaggtccccgccgctcag
cagatgttaaacttccctgaaaagaacaaggaaaaaccaattgatttgcagaactttggt
ctccgtactgacatctactccaagaaaaccttagcaaagagcaaaggagccagtgctggg
cgggagtggacggagcaggagaccctgctgctcctggaggccctggagatgtacaaggac
gactggaacaaggtgtcggagcacgtcgggagccgtacgcaggatgagtgcatcctccac
ttcttgaggcttcccatcgaggacccctacctcgagaactcagacgcctccctggggccc
ctggcgtaccagcctgtccccttcagtcagtcaggaaacccggtcatgagcaccgtggcc
tttctggcgtctgtggtggaccctcgcgtggcgtctgctgccgcaaaggcggctctggag
gagttttctcgagtccgggaggaggtacccctggaattggtggaagcgcacgtcaagaaa
gtacaggaagcagcccgagcctctgggaaggtggatccgacctacggcctggagagcagc
tgcatcgcaggcacgggccccgacgagcccgagaagctcgaaggagcggaagaggagaaa
atggaaacggatgcagatggtccacagcctgaaaaggcagaaagcaaaggggacaatgag
ccagatgaaggggataaagcccaagactgcgaccatgagaagaccagcgagaaggaacag
gatagtgaagttagtgaggacaccaagtcagaggagaaggagaccgaagagaacaaggag
ctcactgatccttacaaagaaagggaaagtgacgttgggaagaagaaagtggaacacgaa
atttctgagggaaacgtcgccacagccgcagcagctgctctggcctcagctgcgacgaaa
gccaagcacctggctgccgtggaagagaggaagatcaagtctctagtcgctctcctggtc
gagacgcagatgaagaaactggagatcaagctgcggcatttcgaggagctggagacgatc
atggacagggagaaggaggccctagagcagcagaggcagcagctgctcaccgaacgccag
aacttccacatggagcagctgaagtacgcggaactgcgcgcccgccagcaaatggagcag
cagcacgggcagaaccccccgcaagggcaccagcactcgggagcgccgggcctggcgccc
ctgggcgccgcggggcacccgggcatgatgccgcaccagcagccgccgccctacccgctg
atgcagcaccagatgccgccgccccacccgccccagccaggtcagatgccaggcccgggc
tccatgatgcctgggcagcccctgccaggccgcatgatccccaccgttacagccaacatc
cacccccctgggagtggccctccccctcccggtatgccgccgatgccgggaaacatctta
ggaccccgggtgaccctcacggcacccaacggcatgtatccccctccgccacagcagcag
ccgccaccaccgccggcagatggagtccctccgcctcctgctgcaggcccacctgcctca
gccgcgccctag
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integrated database retrieval system
