Phyllostomus hastatus (greater spear-nosed bat): 123831194
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Entry
123831194 CDS
T07912
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
phas
Phyllostomus hastatus (greater spear-nosed bat)
Pathway
phas03013
Nucleocytoplasmic transport
phas03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phas00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123831194 (UPF2)
03015 mRNA surveillance pathway
123831194 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phas03019
]
123831194 (UPF2)
Messenger RNA biogenesis [BR:
phas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
123831194 (UPF2)
mRNA cycle factors
P-body specific factors
123831194 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
123831194
NCBI-ProteinID:
XP_045713929
LinkDB
All DBs
Position
Unknown
AA seq
1273 aa
AA seq
DB search
MPAERKKPASMEEKESLLNNKEKDCAERRPVSSNREKPKDEIKLPAKKEVIKVPEDKKKK
LEEDKRKKEDKERKKKEEEKVKAEEELKKKEEEEKKKHEEEERKKQEEQAKRQQEEEAAQ
LKEKEESLQLHQEAWERHQLRKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKT
ITEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYVDFAPSL
LQVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRE
SHTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLTFPPSEIISPEKQQPFQNLLKEYF
TSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLL
DENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPA
ILFKDNEKSCQNKECNKDDSKAEAKEPKDNKEVSNSDDLELELENLEINDDSLELEGADE
AEDLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKA
NRKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQIN
IETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPE
SHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLL
YKDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQE
DVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSF
GVNPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSL
EVWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVHDLEQEFLIKLGLVNDKDS
KDSVAEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDEDEGEEEEEENTDYL
TDSNKENETDEENNEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLD
VAIPLHLKSQLRKGPPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHW
NQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAP
NADLIFKTGGRRR
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaaaaagccagcaagtatggaagaaaaagaatctttgctaaacaac
aaggagaaagactgtgctgaaaggcgtccagtgagcagcaacagggagaaaccaaaagac
gagatcaagctccctgccaagaaggaagttattaaggtccctgaagataaaaagaagaaa
ctggaagaagataagagaaaaaaggaagacaaggaacgcaagaaaaaagaagaagaaaag
gtaaaggcagaagaggaattaaagaaaaaagaggaagaagaaaaaaagaaacatgaagag
gaagagagaaagaagcaagaagaacaggcaaaacgacagcaagaggaagaagctgcccag
ttgaaagaaaaagaagaatctcttcagcttcatcaggaagcttgggaacgacatcagtta
aggaaggaacttcgtagcaaaaaccaaaatgctccagacaaccgaccagaggaaaatttc
tttagtcgactagactcaagtttgaagaaaaataccgcttttgtcaagaaactaaaaact
attacggaacaacagagagactccttgtcccatgattttaatggcctaaatttaagcaaa
tacattgcagaagctgtagcttctattgtggaagcaaagctaaaaatatctgatgtgaat
tgtgctgtgcacttatgttctctgtttcaccagcgctatgtcgactttgctccgtcgctt
ctgcaggtttggaaaaaacattttgaagcaaggaaagaagagaaaacacctaacatcacc
aaattaagaactgatttgcgtttcattgcagaattgacaatagttgggattttcactgac
aaggaaggtctgtctttaatttacgaacagctaaaaaatattattaatgctgatcgggaa
tcacatactcatgtttctgtggtgattagtttttgtcgacattgtggagatgatattgct
ggacttgtaccaaggaaagtaaagagtgctgcagagaagtttaatttgactttccctcct
agtgagataattagtccagagaaacaacaacctttccagaatcttttaaaagaatacttt
acatctttgaccaaacacctgaaaagggaccacagggagctacagaatactgagagacaa
aacaggcgtattctacattctaaaggggagctaagtgaagatagacataaacagtatgag
gaatttgctatgtcttatcagaagctgctggcaaattctcaatccttagcagaccttttg
gatgaaaatatgccagatcttcctcaggacaaaccaacaccagaagagcatgggcctgga
attgatatatttacacctggtaaacctggagaatatgacttggaaggtggtatatgggaa
gatgaagatgctcggaatttttatgagaaccttattgatttgaaagcttttgttccagcc
atcttgtttaaagataatgaaaaaagttgtcagaataaagagtgcaacaaagatgattct
aaagcagaggcaaaagaacctaaggataataaggaggtatcaaattctgatgatttggaa
cttgaattggagaacctagaaattaatgatgacagcttggagttagagggtgcagatgaa
gctgaagatcttacaaaaaaacttctcgatgagcaagaacaagaggacgaagaggccagc
actggatctcatctcaagctcatagtagatgctttcctccagcaattgcccaactgtgtc
aatagagatctgatagacaaggcagcaatggatttttgtatgaacatgaacacaaaagca
aataggaagaagttggtacgggcactttttatagttcccagacaaaggttggatttgcta
ccattttatgcaagattggttgctacattgcatccctgcatgtctgatgtagcagaggat
ctttgttccatgctgaggggggatttcagatttcatgtacgaaaaaaagaccagatcaac
attgaaacaaagaacaaaactgttcgttttattggagaactaactaagtttaagatgttc
acaaaaaatgatacactacattgtttaaagatgcttctatcagacttttcccatcaccat
attgaaatggcatgtaccttactggaaacatgtggaaggtttcttttcagatctccagaa
tctcacttgaggaccagtgtacttttggaacaaatgatgagaaagaaacaagcgatgcat
cttgatgcaagatatgtcacaatggtggagaatgcgtactactactgcaacccaccacca
gctgagaaaacagtgaaaaagaaacgtcctcctctccaggaatatgtccggaaactttta
tacaaggacctctccaaggtcaccactgagaaggttttgagacagatgcgaaagttgccc
tggcaggaccaagaagtgaaagactatgttatttgttgtatgataaacatctggaatgtg
aaatacaatagtattcattgtgtggctaacctcttagccggactagtgctctaccaagag
gatgttggaatccatgttgtggatggagttttagaagatattcgattaggaatggaggtt
aatcagcctaaatttaatcagagacgtatcagcagtgccaagttcttaggggaactttat
aattaccgaatggtggaatcagctgttatttttagaactctttattcttttacttcattt
ggtgttaaccccgatggctctccaagttcactggaccctcctgagcaccttttcagaatt
agactagtgtgcacaattttggacacctgtggccagtactttgacagaggttccagtaaa
cgaaaacttgattgcttccttgtatattttcagcgttatgtttggtggaagaagagtttg
gaggtttggacaaaagatcatccatttcctattgacatagattacatgatcagtgataca
ctagaactgctaagaccaaagatcaaactctgtaattctctggaagaatccatcaggcag
gtacacgacttggaacaagaattcttaataaaactaggcctagtaaatgacaaagattca
aaagattctgtggcagaaggagaaaatcttgaagaggatgaagaagaagaagaaggagga
gctgaaacagaggaacaatctggaaatgaaagtgaagtaaatgaaccagaagaagaggag
ggttctgataatgatgaggatgaaggagaggaagaagaggaagaaaacacagattacctt
acagattcaaataaggagaatgaaacagatgaagaaaataatgaggtaatgatcaaagga
ggtggacttaaacatgtaccttgtgtagaagatgaggatttcattcaagctctggataaa
atgatgctagaaaatcttcagcaacgaagtggtgaatctgttaaggtgcaccaacttgat
gtcgctattcccttgcatctcaaaagccagctgaggaaagggcccccacttggtggtggg
gaaggagaggcagaatccgcagacacgatgccatttgtcatgctaacaagaaaaggcaat
aaacagcagtttaagatccttaatgtacccatgtcttcccaacttgctgcaaatcattgg
aaccagcaacaggcagaacaagaagaaaggatgagaatgaaaaagctcacactagatatc
aatgaacgacaagaacaagaagattatcaagaaatgctgcaatctcttgcccagcgtcca
gctccagcaaacaccaatcgggagcggcggcctcgttaccaacatccaaagggagcacct
aatgcggatctaatctttaagactggtgggaggagacgttga
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