Proteus hauseri: PH4a_13570
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Entry
PH4a_13570 CDS
T05854
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
phau
Proteus hauseri
Pathway
phau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PH4a_13570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phau03019
]
PH4a_13570
03009 Ribosome biogenesis [BR:
phau03009
]
PH4a_13570
Enzymes [BR:
phau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
PH4a_13570
Messenger RNA biogenesis [BR:
phau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PH4a_13570
Ribosome biogenesis [BR:
phau03009
]
Prokaryotic type
rRNA processing factors
PH4a_13570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
PNPase_C
Motif
Other DBs
NCBI-ProteinID:
QAV24310
LinkDB
All DBs
Position
complement(2995654..2999250)
Genome browser
AA seq
1198 aa
AA seq
DB search
MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY
GAERHGFLPIKEIAREYFPSNYHSHGRPNIKDVLKEGQEVIVQVDKEERGNKGAALTTFI
SLAGSYLVLMPNNPRAGGISRRIEGEDRTELKEALSSLEIPDGMGLIVRTAGVGKSAEAL
QQDLSYRLRHWDAIKKAAENRPAPFLIHQESNVIVRAFRDYLRPDIGEILIDNAKVVEMA
RSHIEAIGRGDFASKIRHYTGAVPLFSHYQIESQIESAFQREVRLPSGGALVIDTTEALT
AIDINSSRSTRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQREVE
NRMREAVRQDRARIQIGRISRFGLLEMSRQRLSPSLGESSHHVCPRCLGTGTIRDNESLS
LSVLRLIEEEALKENTHEVHAIVPVQIASYLLNEKRKAVTDIELRQSNVKVVIVPNDQMQ
TPHFSVIRVRKGEEITSLSYNLASFHESQLNEAEDEVVVERKTPEQPAISAFALQPESTT
EVVSKTKAPSAPAKSAESEKTEDSGFFAGITKFFSNLFASKPEPVVEPEKPQENKRENNN
DNRRERRNNNNRRNNNNRRDRDNDRTRDNERNRDNERNRDNATNANNEEIRKNRNQKTPN
TSTEAMSEQEIAEREARRQQRREQRAEQRRRQEEKRQQQLEAAKAQAAQTETSDEIAANK
DDAEKKEEVRRPVMQRRTRRQLTQSIRVTDAQSTTALPVVAASPVSVVDKAISETPVVQS
TPKAVTAAVTAEKVQSPKPVATSKADNNDAQAPKASLETAKQQDEEKQDDNNAQQDNVMP
RRSRRSPRHLRVSGQRRRRYRDERTLTSSPVPLTMAVASPELASGKVWVRYPVTPISDEQ
FVDNNATNNFVSHAEPPVIAITPEATDAIVTEIAQSEQTQATLAVTVSQETTPATDAVAE
IIAVEAQPRIEEKSDTTEIINTVVDEINPQESVTRKENISAVLNTTEAYMHEASQQAETS
ETEKPAVEHVVEHAKETEVAQREESQPVITDNNADVQPMVETITDTTTEAAVEAVVEPVT
DVIVSNVVEPTTTEHNEVATTSGDVTEQNQSEEKAEAVPTTPVANVETLHNLQVVRQLHA
SSPMTKAAASNETAVAIEVKAWEARPAFEKQGRSGAGGHSATNHASSAMAKAESKNEE
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgctaattaacgcgactcaacaggaagagttgcgtgttgcccttgtggat
gggcaacgcttgtacgatctggatatcgaaagccccggtcatgaacaaaagaaagctaac
atctataaaggtaaaatcactcgaattgaacccagcttagaagccgctttcgttgattat
ggtgcggagcgtcatggtttccttcctatcaaagaaattgcccgcgaatattttcctagt
aattatcactctcatggtcgtcctaacatcaaagatgtcttaaaagaaggccaagaagtt
attgtacaagtggataaagaagagcgcggcaacaaaggtgcagcattaaccacttttatc
agccttgcaggtagttatttagtattaatgccaaataacccacgtgcaggtggtatttct
cgtcgtatcgaaggagaagaccgtactgagctgaaagaagcgttatcaagtcttgaaatt
ccagatggaatgggtcttattgttcgtactgctggtgtcggaaaatcagcagaagcacta
caacaagacttaagctatcgtttaagacattgggatgctatcaagaaggccgcagagaac
cgtcctgcaccttttctgattcaccaagaaagtaacgtaatcgttcgcgcattccgtgat
tatctacgtccagatattggtgagatcttaattgataacgcaaaagtagtggaaatggct
cgtagccatatcgaagcgattggtcgtggtgattttgctagcaaaattcgccattacacc
ggcgcggttccgctgtttagtcattatcaaatcgaatcacaaatcgaatctgcatttcag
cgtgaagtacgcttaccttctggtggtgcattagttattgataccaccgaggcattaact
gctatcgatattaactcatcgcgttcaactcgcggtggtgacatcgaagagacagcgttt
aataccaacttagaagcagcagatgaaattgcacgccaattacgtttacgtgaccttggc
ggattaatcgttatcgactttatcgatatgactccggttcgtcatcagcgtgaagttgaa
aacagaatgcgtgaagccgttcgtcaagatcgcgctcgtattcaaattggtcgaatctct
cgctttggcctgttagagatgtctcgtcagcgcttaagcccttcattaggtgaatctagc
caccacgtttgccctcgttgcttaggcacaggaactattcgtgataatgaatcactctca
ctttcagtacttcgtctaattgaagaagaagcgctaaaagaaaatacccatgaagttcat
gcgatagtgccggttcaaattgcctcttatttgcttaacgaaaaacgtaaagcagtaaca
gatattgagctacgtcaatcaaatgtaaaagtggttattgttccaaatgaccaaatgcaa
acgccacatttctctgttattcgtgtgcgtaaaggtgaagaaatcacttctcttagttat
aacttggcctcattccatgaaagccagttaaatgaagccgaagatgaagtcgtggttgag
cgtaaaacaccagagcaaccggctatttctgcatttgctttgcaaccagaaagcacaaca
gaagttgttagtaagaccaaagcaccttctgcgccagcaaaatcggctgaatcagaaaaa
acagaagactcaggtttcttcgctggtattacgaagttcttctctaacttgtttgctagc
aaaccagagccggttgttgagcctgaaaaaccacaggaaaacaaaagagagaataataac
gacaaccgtcgtgaacgtcgtaataacaataatcgtcgcaataataacaatcgccgagat
cgtgataacgaccgtactcgcgataatgaacgtaatcgtgataacgaacgcaatcgcgat
aacgcaactaatgcaaataacgaagaaattcgtaaaaaccgcaatcaaaaaacaccaaat
acttcaactgaagcgatgagtgaacaagagattgcagaacgcgaagcgcgccgtcagcaa
cgccgagaacaacgtgcagagcaacgtcgtcgccaagaagagaaacgccaacagcaacta
gaagcagctaaagcacaagcagcacaaacagaaacaagtgatgaaatcgctgcaaataaa
gatgatgcagagaaaaaagaggaagtacgacgccctgtaatgcaacgccgtactcgtcgt
caattaactcaatctattcgtgttaccgatgcccagagtaccactgcgcttcctgttgta
gcagcatcaccagtttctgtagtagataaagcaatttctgaaacacctgttgttcaaagt
acgccaaaagcagttacggctgcagtgactgcagagaaagtgcaatcacctaaaccggta
gcaactagtaaagcagacaacaatgatgcacaagcaccaaaagcatcattagaaacagca
aaacagcaagatgaagagaaacaagacgacaacaacgcacagcaagataatgtgatgccg
cgtcgctctcgtcgctctcctcgtcatttgcgtgttagtggacaacgccgccgtcgttat
cgtgatgaacgcacactaacctcatcacctgttccgttaacgatggcagttgcatcacca
gaattagcatctggtaaagtgtgggttcgttatcctgtaacaccaatcagtgatgagcaa
tttgttgataataatgcaacaaataactttgtttctcatgctgagccacctgttatcgcg
attacaccagaagcaactgatgccattgtgactgaaattgcacaatctgagcaaacacag
gcaacacttgcggtcacagtaagccaagaaacgacgccagcaacagacgctgttgctgaa
attattgctgttgaagcgcaaccgcgtattgaagaaaaatcagatacaacagaaattatc
aatactgttgttgatgaaattaatccccaagaaagtgttactcgtaaagaaaacatttct
gcggtcttaaatacgactgaagcttatatgcatgaagcatcacagcaagccgaaacttca
gaaactgaaaaacctgctgttgaacatgtagttgaacatgcaaaagaaactgaagtagca
caacgtgaagaaagccaacccgttattacagataataatgctgatgttcagccgatggtt
gagactatcacagacacaaccactgaagctgcagtagaagcagtcgttgagcctgttact
gacgtcattgtgagcaatgtagttgaacctacgacgactgaacataatgaagtcgcgaca
acaagcggtgatgtaactgagcaaaaccaatctgaagaaaaagcggaagctgtaccaaca
acacctgttgctaatgtagaaactctgcacaatctccaagtggtgcgtcagttacatgca
agctcgccaatgacaaaagcggctgcctctaatgaaactgcggtagcaattgaggttaaa
gcttgggaagcgcgccctgcttttgaaaagcaaggccgcagtggtgcgggtggacatagt
gcaaccaaccacgcttcttctgcaatggctaaagctgaaagtaaaaacgaagagtaa
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